RefMet Compound Details

MW structure49954 (View MW Metabolite Database details)
RefMet nameDeoxyribose
Systematic name(4S,5R)-5-(hydroxymethyl)oxolane-2,4-diol
SMILESC1[C@@H]([C@@H](CO)OC1O)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass134.057910 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC5H10O4View other entries in RefMet with this formula
InChIInChI=1S/C5H10O4/c6-2-4-3(7)1-5(8)9-4/h3-8H,1-2H2/t3-,4+,5?/m0/s1
InChIKeyPDWIQYODPROSQH-PYHARJCCSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassCarbohydrates
Main ClassMonosaccharides
Sub ClassPentoses
Pubchem CID9828112
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Deoxyribose

Rxn IDKEGG ReactionEnzyme
R02750 2-Deoxy-D-ribose 5-phosphate + ADP <=> Deoxyribose + ATPATP:2-deoxy-D-ribose 5-phosphotransferase

Table of KEGG human pathways containing Deoxyribose

Pathway IDHuman Pathway# of reactions
hsa00030 Pentose phosphate pathway 1
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