RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0188046
RefMet nameDidesmethylcitalopram
Systematic name1-(3-aminopropyl)-1-(4-fluorophenyl)-3H-isobenzofuran-5-carbonitrile
SynonymsPubChem Synonyms
Exact mass296.132491 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC18H17FN2OView other entries in RefMet with this formula
Molecular descriptors
Molfile206754 (Download molfile/View MW Metabolite Database details)
InChI
InChIKeyRKUKMUWCRLRPEJ-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC(CC1(c2ccc(cc2)F)c2ccc(cc2CO1)C#N)CN
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganoheterocyclic compounds
Main ClassIsocoumarans
Sub ClassIsocoumarans
Distribution of Didesmethylcitalopram in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Didesmethylcitalopram
External Links
Pubchem CID162976
ChEBI ID80604
KEGG IDC16609
HMDB IDHMDB0060472
Chemspider ID143072
Spectral data for Didesmethylcitalopram standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Didesmethylcitalopram

Rxn IDKEGG ReactionEnzyme
R08345 Demethylcitalopram <=> DidemethylcitalopramDemethylcitalopram <=> Didemethylcitalopram
R08348 Didemethylcitalopram + H2O + Oxygen <=> Citalopram aldehyde + Ammonia + Hydrogen peroxidedidemethylcitalopram:oxygen oxidoreductase(deaminating)(flavin-containing)

Table of KEGG human pathways containing Didesmethylcitalopram

Pathway IDHuman Pathway# of reactions
hsa00982 Drug metabolism - cytochrome P450 2
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