RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0042408
RefMet nameFluorescein
Systematic name2-(3-hydroxy-6-keto-xanthen-9-yl)benzoic acid
SynonymsPubChem Synonyms
Exact mass332.068475 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC20H12O5View other entries in RefMet with this formula
Molecular descriptors
Molfile71459 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C20H12O5/c21-11-5-7-15-17(9-11)25-18-10-12(22)6-8-16(18)19(15)13-3-1-2-4-14(13)20(23)24/h1-10,21H,(H,23,24)
InChIKeyYKGGGCXBWXHKIZ-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESc1ccc(c(c1)c1c2ccc(cc2oc2cc(=O)ccc12)O)C(=O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassBenzenoids
Main ClassBenzopyrans
Sub Class1-benzopyrans
Distribution of Fluorescein in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Fluorescein
External Links
Pubchem CID3383
ChEBI ID172923
HMDB IDHMDB0244936
EPA CompToxDTXCID8018887
Spectral data for Fluorescein standards
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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