RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet ID	RM0158253
RefMet name	Geranyl diphosphate
Systematic name	Geranyl pyrophosphate
Synonyms	PubChem Synonyms
Exact mass	314.068431 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C10H20O7P2	View other entries in RefMet with this formula
Molecular descriptors
Molfile	28001 (Download molfile/View MW Metabolite Database details)
InChI	InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+
InChIKey	GVVPGTZRZFNKDS-JXMROGBWSA-N	View other enantiomers/diastereomers of this metabolite in RefMet
SMILES	CC(=CCC/C(=C/COP(=O)(O)OP(=O)(O)O)/C)C Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super Class	Prenol Lipids
Main Class	Isoprenoids
Sub Class	C10 isoprenoids
Distribution of Geranyl diphosphate in NMDR studies
Species	Plot Species distribution
Sample source	Plot Sample source(tissue) distribution
Platform	Platform (MS/NMR) used for detection
Chromatography	Chromatography methods used for detection
Studies	NMDR Studies reporting Geranyl diphosphate
External Links
Pubchem CID	445995
LIPID MAPS	LMPR0102010001
ChEBI ID	17211
KEGG ID	C00341
HMDB ID	HMDB0001285
Chemspider ID	393471
MetaCyc ID	GERANYL-PP
Structural annotation level
Annotation level	1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Geranyl diphosphate

Rxn ID	KEGG Reaction	Enzyme
R01658	Dimethylallyl diphosphate + Isopentenyl diphosphate <=> Diphosphate + Geranyl diphosphate	Dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase

Table of KEGG human pathways containing Geranyl diphosphate

Pathway ID	Human Pathway	# of reactions
hsa00900	Terpenoid backbone biosynthesis	2