RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0045614
RefMet nameGlcCer 16:0;O3/12:0
Alternative nameGlcCer(t16:0/12:0)
Systematic nameN-(dodecanoyl)-1-beta-glucosyl-4R-hydroxyhexadecasphinganine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 28:0;O3 View other entries in RefMet with this sum composition
Exact mass633.481584 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC34H67NO9View other entries in RefMet with this formula
Molecular descriptors
Molfile89885 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C34H67NO9/c1-3-5-7-9-11-13-15-16-18-20-22-27(37)30(39)26(25-43-34-33(42)32(41)31(40)28(24-36)44-34)35-29(38)23-21-19-17-1
4-12-10-8-6-4-2/h26-28,30-34,36-37,39-42H,3-25H2,1-2H3,(H,35,38)/t26-,27+,28+,30-,31+,32-,33+,34+/m0/s1
InChIKeyVQECDPQSQZUHCJ-YFZRIXNCSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCC[C@H]([C@H]([C@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)NC(=O)CCCCCCCCCCC)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 16:0;O3/12:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 16:0;O3/12:0
External Links
Pubchem CID145716830
LIPID MAPSLMSP05019A4B
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 16:0;O3/12:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 16:0;O3/12:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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