RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0159109
RefMet nameGlcCer 16:1;O2/13:0
Alternative nameGlcCer(d16:1/13:0)
Systematic nameN-(tridecanoyl)-1-beta-glucosyl-4E-hexadecasphingenine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 29:1;O2 View other entries in RefMet with this sum composition
Exact mass629.486669 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC35H67NO8View other entries in RefMet with this formula
Molecular descriptors
Molfile89457 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C35H67NO8/c1-3-5-7-9-11-13-15-16-18-20-22-24-29(38)28(27-43-35-34(42)33(41)32(40)30(26-37)44-35)36-31(39)25-23-21-19-17-1
4-12-10-8-6-4-2/h22,24,28-30,32-35,37-38,40-42H,3-21,23,25-27H2,1-2H3,(H,36,39)/b24-22+/t28-,29+,30+,32+,33-,34+,35+/m0/s1
InChIKeyNWNZTFVREJOACS-CYIUIZITSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCC/C=C/[C@H]([C@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)NC(=O)CCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 16:1;O2/13:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 16:1;O2/13:0
External Links
Pubchem CID134753949
LIPID MAPSLMSP05019A6N
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 16:1;O2/13:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 16:1;O2/13:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
  logo