RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0003301
RefMet nameGlcCer 18:0;O3/13:0
Alternative nameGlcCer(t18:0/13:0)
Systematic nameN-(tridecanoyl)-1-beta-glucosyl-4R-hydroxysphinganine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 31:0;O3 View other entries in RefMet with this sum composition
Exact mass675.528534 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC37H73NO9View other entries in RefMet with this formula
Molecular descriptors
Molfile89946 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C37H73NO9/c1-3-5-7-9-11-13-15-16-17-19-21-23-25-30(40)33(42)29(28-46-37-36(45)35(44)34(43)31(27-39)47-37)38-32(41)26-24-2
2-20-18-14-12-10-8-6-4-2/h29-31,33-37,39-40,42-45H,3-28H2,1-2H3,(H,38,41)/t29-,30+,31+,33-,34+,35-,36+,37+/m0/s1
InChIKeyWIABOROJFJRNMG-YDBIPLSOSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCC[C@H]([C@H]([C@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)NC(=O)CCCCCCCCCCCC)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 18:0;O3/13:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 18:0;O3/13:0
External Links
Pubchem CID145716891
LIPID MAPSLMSP05019BTP
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 18:0;O3/13:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 18:0;O3/13:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
  logo