RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0043405
RefMet nameGlcCer 19:0;O3/31:0
Alternative nameGlcCer(t19:0/31:0)
Systematic nameN-(hentriacontanoyl)-1-beta-glucosyl-4R-hydroxynonadecasphinganine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 50:0;O3 View other entries in RefMet with this sum composition
Exact mass941.825884 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC56H111NO9View other entries in RefMet with this formula
Molecular descriptors
Molfile89994 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C56H111NO9/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-26-27-28-29-30-31-33-35-37-39-41-43-45-51(60)57-48(47-65-56-55(
64)54(63)53(62)50(46-58)66-56)52(61)49(59)44-42-40-38-36-34-32-16-14-12-10-8-6-4-2/h48-50,52-56,58-59,61-64H,3-47H2,1-2H3,(H,57,60
)/t48-,49+,50+,52-,53+,54-,55+,56+/m0/s1
InChIKeyFLCLWEJDLZTZQI-QNBCVOSISA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)[C@@H]([C@@H](CCCCCCCCCCCCCCC)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 19:0;O3/31:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 19:0;O3/31:0
External Links
Pubchem CID145716939
LIPID MAPSLMSP05019B9I
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 19:0;O3/31:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 19:0;O3/31:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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