RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0003899
RefMet nameGlcCer 21:0;O2/24:0
Alternative nameGlcCer(d21:0/24:0)
Systematic nameN-(tetracosanoyl)-1-beta-glucosyl-heneicosasphinganine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 45:0;O2 View other entries in RefMet with this sum composition
Exact mass855.752719 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC51H101NO8View other entries in RefMet with this formula
Molecular descriptors
Molfile89717 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C51H101NO8/c1-3-5-7-9-11-13-15-17-19-21-22-23-24-25-27-29-31-33-35-37-39-41-47(55)52-44(43-59-51-50(58)49(57)48(56)46(42-
53)60-51)45(54)40-38-36-34-32-30-28-26-20-18-16-14-12-10-8-6-4-2/h44-46,48-51,53-54,56-58H,3-43H2,1-2H3,(H,52,55)/t44-,45+,46+,48+
,49-,50+,51+/m0/s1
InChIKeyBMNIAFBZTUWBKG-CKJXAXBSSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)[C@@H](CCCCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 21:0;O2/24:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 21:0;O2/24:0
External Links
Pubchem CID145716688
LIPID MAPSLMSP05019CTW
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 21:0;O2/24:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 21:0;O2/24:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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