RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0045640
RefMet nameGlcCer 21:1;O2/19:0
Alternative nameGlcCer(d21:1/19:0)
Systematic nameN-(nonadecanoyl)-1-beta-glucosyl-4E-heneicosasphingenine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 40:1;O2 View other entries in RefMet with this sum composition
Exact mass783.658819 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC46H89NO8View other entries in RefMet with this formula
Molecular descriptors
Molfile89742 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C46H89NO8/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-40(49)39(38-54-46-45(53)44(52)43(51)41(37-48)55-46)47-42(50)3
6-34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h33,35,39-41,43-46,48-49,51-53H,3-32,34,36-38H2,1-2H3,(H,47,50)/b35-33+/t39-,40+,
41+,43+,44-,45+,46+/m0/s1
InChIKeyWQQTUCSIOMFJDD-CNUVFPMCSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCC/C=C/[C@H]([C@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)NC(=O)CCCCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 21:1;O2/19:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 21:1;O2/19:0
External Links
Pubchem CID145716705
LIPID MAPSLMSP05019CXR
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 21:1;O2/19:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 21:1;O2/19:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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