RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0023589
RefMet nameGlcCer 22:0;O2/24:0
Alternative nameGlcCer(d22:0/24:0)
Systematic nameN-(tetracosanoyl)-1-beta-glucosyl-docosasphinganine
SynonymsPubChem Synonyms
Sum CompositionGlcCer 46:0;O2 View other entries in RefMet with this sum composition
Exact mass869.768369 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC52H103NO8View other entries in RefMet with this formula
Molecular descriptors
Molfile89777 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C52H103NO8/c1-3-5-7-9-11-13-15-17-19-21-22-23-24-26-28-30-32-34-36-38-40-42-48(56)53-45(44-60-52-51(59)50(58)49(57)47(43-
54)61-52)46(55)41-39-37-35-33-31-29-27-25-20-18-16-14-12-10-8-6-4-2/h45-47,49-52,54-55,57-59H,3-44H2,1-2H3,(H,53,56)/t45-,46+,47+,
49+,50-,51+,52+/m0/s1
InChIKeyJDSGIBDSIBWPBT-SMVOYVNOSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O)O)O)[C@@H](CCCCCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHexCer (Hexosyl ceramides)
Distribution of GlcCer 22:0;O2/24:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting GlcCer 22:0;O2/24:0
External Links
Pubchem CID145716731
LIPID MAPSLMSP05019C5F
KEGG IDC01190
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving GlcCer 22:0;O2/24:0

Rxn IDKEGG ReactionEnzyme
R01497 UDP-glucose + N-Acylsphingosine <=> UDP + GlucosylceramideUDP-glucose:N-acylsphingosine D-glucosyltransferase
R01498 Glucosylceramide + H2O <=> D-Glucose + N-AcylsphingosineD-Glucosyl-N-acylsphingosine glucohydrolase
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase

Table of KEGG human pathways containing GlcCer 22:0;O2/24:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
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