RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0137023
RefMet nameKinamycin D
Systematic name(1R,2R,3R,4S)-11-diazo-2,4,9-trihydroxy-2-methyl-5,10-dioxo-2,3,4,5,10,11-hexahydro-1H-benzo[b]fluorene-1,3-diyl diacetate
SynonymsPubChem Synonyms
Exact mass454.101233 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC22H18N2O9View other entries in RefMet with this formula
Molecular descriptors
Molfile54448 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C22H18N2O9/c1-7(25)32-20-15-13(19(30)21(22(20,3)31)33-8(2)26)12-14(16(15)24-23)18(29)11-9(17(12)28)5-4-6-10(11)27/h4-6,19
-21,27,30-31H,1-3H3/t19-,20+,21+,22+/m0/s1
InChIKeyKPVVXTRWIKTJBS-DXBBTUNJSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(=O)O[C@@H]1c2c(c3=c(c2=[N+]=[N-])c(=O)c2c(cccc2O)c3=O)[C@@H]([C@H]([C@]1(C)O)OC(=O)C)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassBenzenoids
Main ClassNaphthalenes
Sub ClassNaphthols
Distribution of Kinamycin D in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Kinamycin D
External Links
Pubchem CID135440049
ChEBI ID31751
KEGG IDC12394
Spectral data for Kinamycin D standards
NP-MRD ID(NMR)View NMR spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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