RefMet Compound Details

MW structure15052 (View MW Metabolite Database details)
RefMet nameLPC O-16:0
Alternative nameLPC(O-16:0)
Systematic name1-hexadecyl-sn-glycero-3-phosphocholine
SMILESCCCCCCCCCCCCCCCCOC[C@H](COP(=O)([O-])OCC[N+](C)(C)C)O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Sum CompositionLPC O-16:0 View other entries in RefMet with this sum composition
Exact mass481.353227 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC24H52NO6PView other entries in RefMet with this formula
InChIInChI=1S/C24H52NO6P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-18-20-29-22-24(26)23-31-32(27,28)30-21-19-25(2,3)4/h24,26H,5-23H2,1-4H3/t
24-/m1/s1
InChIKeyVLBPIWYTPAXCFJ-XMMPIXPASA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassGlycerophospholipids
Main ClassGlycerophosphocholines
Sub ClassO-LPC (Ether Lysophosphatidylcholines)
Pubchem CID162126
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving LPC O-16:0

Rxn IDKEGG ReactionEnzyme
R03438 Acyl-CoA + 1-Organyl-2-lyso-sn-glycero-3-phosphocholine <=> CoA + 1-Radyl-2-acyl-sn-glycero-3-phosphocholineAcyl-CoA:1-alkyl-sn-glycero-3-phosphocholine O-acyltransferase
R03437 Acetyl-CoA + 1-Organyl-2-lyso-sn-glycero-3-phosphocholine <=> CoA + 2-Acetyl-1-alkyl-sn-glycero-3-phosphocholineAcetyl-CoA:1-alkyl-sn-glycero-3-phosphocholine 2-O-acetyltransferase
R04452 2-Acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O <=> 1-Organyl-2-lyso-sn-glycero-3-phosphocholine + Acetate1-Alkyl-2-acetyl-sn-glycero-3-phosphocholine acetohydrolase
R07387 1-Radyl-2-acyl-sn-glycero-3-phosphocholine + H2O <=> 1-Organyl-2-lyso-sn-glycero-3-phosphocholine + Carboxylateplasmanylcholine 2-acylhydrolase

Table of KEGG human pathways containing LPC O-16:0

Pathway IDHuman Pathway# of reactions
hsa00565 Ether lipid metabolism 4
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