RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0041659
RefMet nameLacCer 21:1;O2/18:0
Alternative nameLacCer(d21:1/18:0)
Systematic nameN-(octadecanoyl)-1-beta-lactosyl-4E-heneicosasphingenine
SynonymsPubChem Synonyms
Sum CompositionLacCer 39:1;O2 View other entries in RefMet with this sum composition
Exact mass931.695994 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC51H97NO13View other entries in RefMet with this formula
Molecular descriptors
Molfile90534 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C51H97NO13/c1-3-5-7-9-11-13-15-17-19-21-22-24-26-28-30-32-34-40(55)39(52-43(56)35-33-31-29-27-25-23-20-18-16-14-12-10-8-6
-4-2)38-62-50-48(61)46(59)49(42(37-54)64-50)65-51-47(60)45(58)44(57)41(36-53)63-51/h32,34,39-42,44-51,53-55,57-61H,3-31,33,35-38H2
,1-2H3,(H,52,56)/b34-32+/t39-,40+,41+,42+,44-,45-,46+,47+,48+,49+,50+,51-/m0/s1
InChIKeyCZJMDGHSVDFQBR-OLFZTXQKSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCC/C=C/[C@H]([C@H](CO[C@H]1C(C([C@@H]([C@@H](CO)O1)O[C@H]1C(C([C@H]([C@@H](CO)O1)O)O)O)O)O)NC(=O)CCCCCCCCCCCCCCCCC)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSphingolipids
Main ClassGlycosphingolipids
Sub ClassHex2Cer (Dihexosyl ceramides)
Distribution of LacCer 21:1;O2/18:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting LacCer 21:1;O2/18:0
External Links
Pubchem CID145717478
LIPID MAPSLMSP05019IOP
KEGG IDC01290
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving LacCer 21:1;O2/18:0

Rxn IDKEGG ReactionEnzyme
R03354 Glucosylceramide + UDP-alpha-D-galactose <=> Lactosylceramide + UDPUDP-alpha-D-galactose:beta-D-glucosyl-(1<->1)-ceramide 4-beta-D-galactosyltransferase
R03355 Lactosylceramide + H2O <=> Glucosylceramide + D-Galactosebeta-D-Galactosyl-1,4-beta-D-glucosylceramide galactohydrolase
R05937 CMP-N-acetylneuraminate + Lactosylceramide <=> CMP + GM3CMP-N-acetylneuraminate + Lactosylceramide <=> CMP + GM3
R05938 UDP-N-acetyl-D-galactosamine + Lactosylceramide <=> UDP + GA2UDP-N-acetyl-D-galactosamine + Lactosylceramide <=> UDP + GA2
R05971 UDP-N-acetyl-D-glucosamine + Lactosylceramide <=> UDP + Lc3CerUDP-N-acetyl-D-glucosamine + Lactosylceramide <=> UDP + Lc3Cer
R12960 3'-Phosphoadenylyl sulfate + Lactosylceramide <=> Adenosine 3',5'-bisphosphate + Lactosylceramide sulfate3'-phosphoadenylyl-sulfate:lactosylceramide 3'-sulfotransferase
R12961 Lactosylceramide sulfate + H2O <=> Lactosylceramide + Sulfatelactosylceramide-sulfate sulfohydrolase

Table of KEGG human pathways containing LacCer 21:1;O2/18:0

Pathway IDHuman Pathway# of reactions
hsa00600 Sphingolipid metabolism 4
hsa00604 Glycosphingolipid biosynthesis - ganglio series 2
hsa01100 Metabolic pathways 2
hsa00601 Glycosphingolipid biosynthesis - lacto and neolacto series 1
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