RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0056113
RefMet namePA 39:0/39:0
Alternative namePA(39:0/39:0)
Systematic name1-2-di-nonatriacontanoyl-sn-glycero-3-phosphate
SynonymsPubChem Synonyms
Sum CompositionPA 78:0 View other entries in RefMet with this sum composition
Exact mass1293.192908 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC81H161O8PView other entries in RefMet with this formula
Molecular descriptors
Molfile90706 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C81H161O8P/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-35-37-39-41-43-45-47-49-51-53-55-57-59-61-63-65-67-69-71-73-75-
80(82)87-77-79(78-88-90(84,85)86)89-81(83)76-74-72-70-68-66-64-62-60-58-56-54-52-50-48-46-44-42-40-38-36-34-32-30-28-26-24-22-20-1
8-16-14-12-10-8-6-4-2/h79H,3-78H2,1-2H3,(H2,84,85,86)/t79-/m1/s1
InChIKeyJNYVOQCMMAAHAW-CCIWDQKQSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)O)OC(=O)CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassGlycerophospholipids
Main ClassGlycerophosphates
Sub ClassPA (Phosphatidic acids)
Distribution of PA 39:0/39:0 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting PA 39:0/39:0
External Links
Pubchem CID145717630
LIPID MAPSLMGP10019FLM
KEGG IDC00416
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving PA 39:0/39:0

Rxn IDKEGG ReactionEnzyme
R01310 Phosphatidylcholine + H2O <=> Phosphatidate + Cholinephosphatidylcholine phosphatidohydrolase
R01799 CTP + Phosphatidate <=> Diphosphate + CDP-diacylglycerolCTP:phosphatidate cytidyltransferase
R02051 Phosphatidylethanolamine + H2O <=> Ethanolamine + Phosphatidatephosphatidylethanolamine phosphatidohydrolase
R02239 Phosphatidate + H2O <=> 1,2-Diacyl-sn-glycerol + Orthophosphate1,2-diacyl-sn-glycerol 3-phosphate phosphohydrolase
R02240 ATP + 1,2-Diacyl-sn-glycerol <=> ADP + PhosphatidateATP:1,2-diacylglycerol 3-phosphotransferase
R02241 Phosphatidate + CoA <=> 1-Acyl-sn-glycerol 3-phosphate + Acyl-CoAacyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase
R09944 CTP + 1,2-Diacyl-sn-glycerol <=> CDP + PhosphatidateCTP:1,2-diacyl-sn-glycerol 3-phosphotransferase

Table of KEGG human pathways containing PA 39:0/39:0

Pathway IDHuman Pathway# of reactions
hsa00564 Glycerophospholipid metabolism 6
hsa00561 Glycerolipid metabolism 3
hsa04070 Phosphatidylinositol signaling system 2
hsa01100 Metabolic pathways 1
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