RefMet Compound Details

MW structure37824 (View MW Metabolite Database details)
RefMet namePyridoxal 5'-phosphate
Systematic name[(4-formyl-5-hydroxy-6-methylpyridin-3-yl)methoxy]phosphonic acid
SMILESCc1ncc(COP(=O)(O)O)c(C=O)c1O   Run Tanimoto similarity search (with similarity coefficient >=0.6)
Exact mass247.024577 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC8H10NO6PView other entries in RefMet with this formula
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-NView other enantiomers/diastereomers of this metabolite in RefMet
Super ClassAlkaloids
Main ClassNicotinic acid alkaloids
Sub ClassPyridine alkaloids
Pubchem CID1051
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Pyridoxal 5''-phosphate

Rxn IDKEGG ReactionEnzyme
R00278 Pyridoxine phosphate + Oxygen <=> Hydrogen peroxide + Pyridoxal phosphatepyridoxine 5-phosphate:oxygen oxidoreductase
R00174 ATP + Pyridoxal <=> ADP + Pyridoxal phosphateATP:pyridoxal 5'-phosphotransferase
R00277 Pyridoxamine phosphate + H2O + Oxygen <=> Pyridoxal phosphate + Ammonia + Hydrogen peroxidepyridoxamine-5'-phosphate:oxygen oxidoreductase (deaminating)
R00173 Pyridoxal phosphate + H2O <=> Pyridoxal + Orthophosphatepyridoxal-5'-phosphate phosphohydrolase

Table of KEGG human pathways containing Pyridoxal 5''-phosphate

Pathway IDHuman Pathway# of reactions
hsa00750 Vitamin B6 metabolism 4