RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet ID	RM0158596
RefMet name	Ribose 5-phosphate
Systematic name	{[(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid
Synonyms	PubChem Synonyms
Exact mass	230.019158 (neutral)	Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M+2K-H]+ [M+Na]+ [M+2Na]2+ [M+2Na-H]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M.CH3]+ [M+Ag]+ [M+H+CH3OH]+ [M+H+CH3CN]+ [M+H+2CH3CN]+ [M+Na+CH3CN]+ [M.NaFormate+H]+ [M.NH4Formate+H]+ [M.TMSi]+ [M.tBuDMSi]+ [M+H-Hexose]+ [M+H-EtnP]+ [M+H-SerP]+ [M-H]- [M-H-H2O]- [M-CH3]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+Na-2H]- [M+K-2H]- [M.Formate]- [M.NaFormate-H]- [M.NH4Formate-H]- [M.F]- [M-H-Ser]- [M.HF2]- M(neutral)    View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
Formula	C5H11O8P	View other entries in RefMet with this formula
Molecular descriptors
Molfile	37864 (Download molfile/View MW Metabolite Database details)
InChI	InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5?/m1/s1
InChIKey	KTVPXOYAKDPRHY-SOOFDHNKSA-N	View other enantiomers/diastereomers of this metabolite in RefMet
SMILES	C([C@@H]1[C@H]([C@H](C(O)O1)O)O)OP(=O)(O)O Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super Class	Carbohydrates
Main Class	Monosaccharides
Sub Class	Pentose phosphates
Distribution of Ribose 5-phosphate in NMDR studies
Species	Plot Species distribution
Sample source	Plot Sample source(tissue) distribution
Platform	Platform (MS/NMR) used for detection
Chromatography	Chromatography methods used for detection
Studies	NMDR Studies reporting Ribose 5-phosphate
External Links
Pubchem CID	439167
ChEBI ID	52742
KEGG ID	C00117
HMDB ID	HMDB0001548
Chemspider ID	388313
Spectral data for Ribose 5-phosphate standards
BMRB ID(NMR)	View NMR spectra
NP-MRD ID(NMR)	View NMR spectra
MassBank(EU)	View MS spectra
Structural annotation level
Annotation level	1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving Ribose 5-phosphate

Rxn ID	KEGG Reaction	Enzyme
R01049	ATP + D-Ribose 5-phosphate <=> AMP + 5-Phospho-alpha-D-ribose 1-diphosphate	ATP:D-ribose-5-phosphate diphosphotransferase
R01051	ATP + D-Ribose <=> ADP + D-Ribose 5-phosphate	ATP:D-ribose 5-phosphotransferase
R01054	ADP-ribose + H2O <=> AMP + D-Ribose 5-phosphate	ADP-ribose ribophosphohydrolase
R01056	D-Ribose 5-phosphate <=> D-Ribulose 5-phosphate	D-ribose-5-phosphate aldose-ketose-isomerase
R01057	alpha-D-Ribose 1-phosphate <=> D-Ribose 5-phosphate	D-Ribose 1,5-phosphomutase
R01641	Sedoheptulose 7-phosphate + D-Glyceraldehyde 3-phosphate <=> D-Ribose 5-phosphate + D-Xylulose 5-phosphate	sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehyde transferase

Table of KEGG human pathways containing Ribose 5-phosphate

Pathway ID	Human Pathway	# of reactions
hsa00030	Pentose phosphate pathway	5
hsa00230	Purine metabolism	3
hsa01200	Carbon metabolism	3
hsa01230	Biosynthesis of amino acids	3