RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0161012
RefMet nameVitamin D2
Systematic name(5Z,7E,22E)-(3S)-9,10-seco-5,7,10(19),22-ergostatetraen-3-ol
SynonymsPubChem Synonyms
Exact mass396.339215 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC28H44OView other entries in RefMet with this formula
Molecular descriptors
Molfile35499 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C28H44O/c1-19(2)20(3)9-10-22(5)26-15-16-27-23(8-7-17-28(26,27)6)12-13-24-18-25(29)14-11-21(24)4/h9-10,12-13,19-20,22,25-2
7,29H,4,7-8,11,14-18H2,1-3,5-6H3/b10-9+,23-12+,24-13-/t20-,22+,25-,26+,27-,28+/m0/s1
InChIKeyMECHNRXZTMCUDQ-RKHKHRCZSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(C)[C@@H](C)/C=C/[C@@H](C)[C@H]1CC[C@H]2/C(=C/C=C\3/C[C@H](CCC3=C)O)/CCC[C@]12C
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSterol Lipids
Main ClassSecosterols
Sub ClassVitamin D2
Distribution of Vitamin D2 in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Vitamin D2
External Links
Pubchem CID5280793
LIPID MAPSLMST03010001
ChEBI ID28934
KEGG IDC05441
HMDB IDHMDB0000900
Chemspider ID4444351
MetaCyc IDVITAMIN_D2
EPA CompToxDTXCID50209021
Spectral data for Vitamin D2 standards
BMRB ID(NMR)View NMR spectra
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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