RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0138907
RefMet nameVitamin D3 glucosiduronate
Systematic name(5Z,7E)-(3S)-9,10-seco-5,7,10(19)-cholestatrien-3-glucosiduronate
SynonymsPubChem Synonyms
Exact mass560.371305 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC33H52O7View other entries in RefMet with this formula
Molecular descriptors
Molfile36150 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C33H52O7/c1-19(2)8-6-9-21(4)25-15-16-26-22(10-7-17-33(25,26)5)12-13-23-18-24(14-11-20(23)3)39-32-29(36)27(34)28(35)30(40-
32)31(37)38/h12-13,19,21,24-30,32,34-36H,3,6-11,14-18H2,1-2,4-5H3,(H,37,38)/b22-12+,23-13-/t21-,24+,25-,26+,27+,28+,29-,30+,32-,33
-/m1/s1
InChIKeyHSMHKPFJPOTDCW-MFDWXRHISA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESCC(C)CCC[C@@H](C)[C@H]1CC[C@H]2/C(=C/C=C\3/C[C@H](CCC3=C)O[C@H]3[C@@H]([C@H]([C@@H]([C@@H](C(=O)O)O3)O)O)O)/CCC[C@]12C
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassSterol Lipids
Main ClassSecosterols
Sub ClassVitamin D3
Distribution of Vitamin D3 glucosiduronate in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
PlatformPlatform (MS/NMR) used for detection
ChromatographyChromatography methods used for detection
StudiesNMDR Studies reporting Vitamin D3 glucosiduronate
External Links
Pubchem CID24779623
LIPID MAPSLMST03020610
ChEBI ID166755
HMDB IDHMDB0259846
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)
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