RefMet Compound Details

RefMet ID, RefMet name, exact mass and formula
RefMet IDRM0160118
RefMet namesn-Glycero-3-phosphate
Systematic name[(2R)-2,3-dihydroxypropoxy]phosphonic acid
SynonymsPubChem Synonyms
Exact mass172.013678 (neutral)
Calculate m/z:   
View other RefMet entries with this exact (neutral) mass:   +/- 0.05 amu   +/- 0.1 amu   +/- 0.2 amu   +/- 0.5 amu
FormulaC3H9O6PView other entries in RefMet with this formula
Molecular descriptors
Molfile37088 (Download molfile/View MW Metabolite Database details)
InChIInChI=1S/C3H9O6P/c4-1-3(5)2-9-10(6,7)8/h3-5H,1-2H2,(H2,6,7,8)/t3-/m1/s1
InChIKeyAWUCVROLDVIAJX-GSVOUGTGSA-NView other enantiomers/diastereomers of this metabolite in RefMet
SMILESC([C@H](COP(=O)(O)O)O)O
Run Tanimoto similarity search (with similarity coefficient >=0.6)
Chemical/Biochemical Classification
Super ClassOrganic acids
Main ClassOrganic phosphoric acids
Sub ClassOrganic phosphoric acids
Distribution of sn-Glycero-3-phosphate in NMDR studies
SpeciesPlot Species distribution
Sample sourcePlot Sample source(tissue) distribution
StudiesNMDR Studies reporting sn-Glycero-3-phosphate
External Links
Pubchem CID439162
ChEBI ID15978
KEGG IDC00093
HMDB IDHMDB0000126
Chemspider ID388308
MetaCyc IDGLYCEROL-3P
Spectral data for sn-Glycero-3-phosphate standards
NP-MRD ID(NMR)View NMR spectra
MassBank(EU)View MS spectra
Structural annotation level
Annotation level1   (1:Known structure; 2:Known regiochemistry; 3:Partial structure; 4:Sum-composition)

Table of KEGG reactions in human pathways involving sn-Glycero-3-phosphate

Rxn IDKEGG ReactionEnzyme
R00841 sn-Glycerol 3-phosphate + H2O <=> Glycerol + Orthophosphatesn-glycerol-3-phosphate phosphohydrolase
R00842 sn-Glycerol 3-phosphate + NAD+ <=> Glycerone phosphate + NADH + H+sn-Glycerol-3-phosphate:NAD+ 2-oxidoreductase
R00847 ATP + Glycerol <=> ADP + sn-Glycerol 3-phosphateATP:glycerol 3-phosphotransferase
R00848 sn-Glycerol 3-phosphate + FAD <=> Glycerone phosphate + FADH2sn-Glycerol-3-phosphate:(acceptor) 2-oxidoreductase
R00851 sn-Glycerol 3-phosphate + Acyl-CoA <=> 1-Acyl-sn-glycerol 3-phosphate + CoAacyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase
R00855 CDP-glycerol + H2O <=> CMP + sn-Glycerol 3-phosphateCDPglycerol phosphoglycerohydrolase
R12241 Acyl phosphate + sn-Glycerol 3-phosphate <=> 1-Acyl-sn-glycerol 3-phosphate + Orthophosphateacyl phosphoate:sn-glycerol 3-phosphate acyltransferase

Table of KEGG human pathways containing sn-Glycero-3-phosphate

Pathway IDHuman Pathway# of reactions
hsa00564 Glycerophospholipid metabolism 6
hsa00561 Glycerolipid metabolism 2
hsa01100 Metabolic pathways 2
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