Return to study ST000016 main page

MB Sample ID: SA000973

Local Sample ID:S00004523
Subject ID:SU000032
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Species Group:Human

Select appropriate tab below to view additional metadata details:


Subject:

Subject ID:SU000032
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Species Group:Human

Factors:

Local Sample IDMB Sample IDFactor Level IDLevel ValueFactor Name
S00004523SA000973FL000378DMSONPM-ALK treatment
S00004523SA000973FL000378CellsMaterial
S00004523SA000973FL000378SR786Cell type

Collection:

Collection ID:CO000016
Collection Summary:-
Sample Type:Lymphoma cells

Treatment:

Treatment ID:TR000030
Treatment Compound:No transfection | WT NPM-ALK tf | K210R NPM-ALK tf | DMSO | CEP-26939

Sample Preparation:

Sampleprep ID:SP000029
Sampleprep Summary:-
Sampleprep Protocol Filename:EX00125-Sample_preparation_protocol.pdf

Combined analysis:

Analysis ID AN000033
Analysis type MS
Chromatography type Reversed phase
Chromatography system Agilent 1200
Column Waters Acquity HSS T3 reversed-phase
MS Type ESI
MS instrument type QTOF
MS instrument name Agilent 6530 QTOF
Ion Mode POSITIVE
Units Peak area

Chromatography:

Chromatography ID:CH000016
Methods ID:EX00125-LCMS-method.pdf
Instrument Name:Agilent 1200
Column Name:Waters Acquity HSS T3 reversed-phase
Column Temperature:40C
Flow Gradient:0-0.5 min 1% B, 0.5-2 min 1-99% B, 2-6 min 99% B, 6-9 min 1% B.
Flow Rate:0.35 mL/min
Solvent A:100% water; 0.1% formic acid
Solvent B:100% methanol; 0.1% formic acid
Chromatography Type:Reversed phase

MS:

MS ID:MS000032
Analysis ID:AN000033
Instrument Name:Agilent 6530 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:POSITIVE
Acquisition Parameters File:EX00125-LCMS-method.pdf
Processing Parameters File:EX00125-Data_analysis-method.pdf
  logo