Summary of Study ST001080

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench,, where it has been assigned Project ID PR000723. The data can be accessed directly via it's Project DOI: 10.21228/M87384 This work is supported by NIH grant, U2C- DK119886.


This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001080
Study TitleDynamic labeling of intracellular metabolites in PCC 7002
Study TypeTimecourse experiment
Study SummaryThe experiment was conducted in a reactor at a metabolic steady state (OD 730 nm = 0.8). 13C labeled sodium bicarbonate was used as a tracer. Tracer concentration was 1 g/L. After the introduction of the tracer, the samples were collected at time point : 0, 60, 120, 180 and 240 secs. Samples were quenched with methanol and extracted using methanol-chloroform-water method. Extracts were stored at -80 degree C till LCMS analysis.
Indian Institute of Technology Bombay
DepartmentDepartment of Chemical Engineering
LaboratoryBio systems Engineering Lab
Last NameWangikar
First NamePramod
Submit Date2018-10-18
Raw Data AvailableYes
Raw Data File Type(s)wiff
Analysis Type DetailLC-MS
Release Date2019-08-01
Release Version1
Pramod Wangikar Pramod Wangikar application/zip

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Subject type: Bacteria; Subject species: Synechococcus sp. PCC 7002 (Factor headings shown in green)

mb_sample_id local_sample_id Genotype
SA072837PCC 7002 180 SEC REP 2Wild type
SA072838PCC 7002 240 SEC REP 1Wild type
SA072839PCC 7002 240 SEC REP 2Wild type
SA072840PCC 7002 180 SEC REP 1Wild type
SA072841PCC 7002 120 SEC REP 2Wild type
SA072842PCC 7002 0 SEC REP 2Wild type
SA072843PCC 7002 60 SEC REP 1Wild type
SA072844PCC 7002 60 SEC REP 2Wild type
SA072845PCC 7002 120 SEC REP 1Wild type
SA072846PCC 7002 0 SEC REP 1Wild type
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