Summary of Study ST001125
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000754. The data can be accessed directly via it's Project DOI: 10.21228/M8709G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001125 |
| Study Title | WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media (part I) |
| Study Summary | Lipid profiling was applied to WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media revealing a greater variety of Bacteroides-derived sphingolipids than previously recognized, including ceramide phosphoinositol and deoxy-sphingolipids. |
| Institute | Broad Institute of MIT and Harvard |
| Department | Gastrointestinal Unit, Center for the Study of Inflammatory Bowel Disease, University Medical Center Groningen |
| Last Name | Avila-Pacheco |
| First Name | Julian |
| Address | 415 Main Street |
| jravilap@broadinstitute.org | |
| Phone | 617-714-8264 |
| Submit Date | 2019-01-15 |
| Num Groups | 4 |
| Total Subjects | 8 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2019-03-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Bacteria; Subject species: Bacteroides thetaiotaomicron VPI-5482;Bacteroides ovatus ATCC 8483 (Factor headings shown in green)
| mb_sample_id | local_sample_id | Species | Strain |
|---|---|---|---|
| SA078040 | BOSPT_1 | Bacteroides ovatus | SPT K.O. (BACOVA_02588) |
| SA078041 | BOSPT_2 | Bacteroides ovatus | SPT K.O. (BACOVA_02588) |
| SA078042 | BOWT_2 | Bacteroides ovatus | WT (ATCC_8483) |
| SA078043 | BOWT_1 | Bacteroides ovatus | WT (ATCC_8483) |
| SA078044 | BTSPT_1 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
| SA078045 | BTSPT_2 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
| SA078046 | BTWT_2 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
| SA078047 | BTWT_1 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
| Showing results 1 to 8 of 8 |
