Summary of Study ST001127
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000754. The data can be accessed directly via it's Project DOI: 10.21228/M8709G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001127 |
Study Title | Lipid profiling of caecal samples from GF mice colonized with B. thetaiotaomicron WT or the ΔSPT mutants (part III) |
Study Summary | To study Bacteroidetes sphingolipids in intestinal health, we colonized germ-free mice with wild type or a sphingolipid-deficient Bacteroides thetaiotaomicron strain. A lack of Bacteroides derived sphingolipids increased intestinal inflammation, dysregulated innate immunity and altered the host ceramide pool. |
Institute | Broad Institute of MIT and Harvard |
Last Name | Avila-Pacheco |
First Name | Julian |
Address | 415 Main Street |
jravilap@broadinstitute.org | |
Phone | 617-714-8264 |
Submit Date | 2019-01-17 |
Num Groups | 3 |
Total Subjects | 14 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2019-03-06 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)
mb_sample_id | local_sample_id | Inoculum | Strain |
---|---|---|---|
SA078054 | BTSPR Cecal_3 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078055 | BTSPR Cecal_4 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078056 | BTSPR Cecal_6 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078057 | BTSPR Cecal_1 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078058 | BTSPR Cecal_5 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078059 | BTSPR Cecal_2 | Bacteroides thetaiotaomicron | SPT K.O. (BT_0870) |
SA078060 | BTWT Cecal_3 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078061 | BTWT Cecal_2 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078062 | BTWT Cecal_1 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078063 | BTWT Cecal_4 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078064 | BTWT Cecal_5 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078065 | BTWT Cecal_6 | Bacteroides thetaiotaomicron | WT (VPI-5482) |
SA078066 | GF Cecal_1 | None | None |
SA078067 | GF Cecal_2 | None | None |
Showing results 1 to 14 of 14 |