Metabolomics Structure Database

 
MW REGNO: 30658
Common Name:Cer(d18:0/24:0)
Systematic Name:N-(tetracosanoyl)-sphinganine
RefMet Name:Cer 18:0;O2/24:0
Synonyms:C24DH Cer; N-(tetracosanoyl)-dihydroceramide; N-(tetracosanoyl)-dihydroceramide [PubChem Synonyms]
Exact Mass:
651.6529 (neutral)    Calculate m/z:
Formula:C42H85NO3
InChIKey:BPLYVSYSBPLDOA-WVILEFPPSA-N
LIPID MAPS Category:Sphingolipids [SP]
LIPID MAPS mainclass:Ceramides [SP02]
LIPID MAPS subclass:N-acylsphinganines (dihydroceramides) [SP0202]
SMILES:CCCCCCCCCCCCCCCCCCCCCCCC(=O)N[C@@H](CO)[C@@H](CCCCCCCCCCCCCCC)O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:5283577
LIPID MAPS ID:LMSP02020012
CHEBI ID:52961
HMDB ID:HMDB0011768
Chemspider ID:4446690

Calculated physicochemical properties (?):

Heavy Atoms: 46  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 39  
van der Waals Molecular volume: 769.89 Å3 molecule-1  
Toplogical Polar Sufrace Area: 69.56 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 3  
logP: 13.77  
Molar Refractivity: 204.10  
Fraction sp3 Carbons: 0.98  
sp3 Carbons: 41  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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