Metabolomics Structure Database

 
MW REGNO: 34384
Common Name:27-hydroxy-cholesterol
Systematic Name:cholest-5-en-3beta,26-diol
RefMet Name:27-Hydroxycholesterol
Synonyms:26-hydroxy-cholesterol [PubChem Synonyms]
Exact Mass:
402.3498 (neutral)    Calculate m/z:
Formula:C27H46O2
InChIKey:FYHRJWMENCALJY-CCDZVGGQSA-N
LIPID MAPS Category:Sterol Lipids [ST]
LIPID MAPS mainclass:Sterols [ST01]
LIPID MAPS subclass:Cholesterol and derivatives [ST0101]
SMILES:CC(CCC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4C[C@H](CC[C@]4(C)[C@H]3CC[C@]12C)O)CO
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:99470
LIPID MAPS ID:LMST01010057
CHEBI ID:17703
HMDB ID:HMDB0062328
KEGG ID:C15610
MetaCyc ID:CPD-7287
Plant Metabolite Hub(Pmhub):MS000024683

Calculated physicochemical properties (?):

Heavy Atoms: 29  
Rings: 4  
Aromatic Rings: 0  
Rotatable Bonds: 6  
van der Waals Molecular volume: 441.16 Å3 molecule-1  
Toplogical Polar Sufrace Area: 40.46 Å2 molecule-1  
Hydrogen Bond Donors: 2  
Hydrogen Bond Acceptors: 2  
logP: 6.93  
Molar Refractivity: 121.47  
Fraction sp3 Carbons: 0.93  
sp3 Carbons: 25  

Human Pathway links:

REACTOME pathways containing this metabolite

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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