Studies involving sample source:Bacterial cells
| Study ID | Study Title | Species | Institute |
|---|---|---|---|
| ST000085 | Salmonella Modulates Metabolism during Growth under Conditions that Induce Expression of Virulence Genes | Salmonella typhimurium | Pacific Northwest National Laboratory |
| ST000116 | Comparative metabolomics analysis of the key metabolic nodes in propionic acid synthesis in Propionibacterium acidipropionici | Propionibacterium | Jiangnan University |
| ST000117 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family GC-MS (Part 1) | Escherichia coli | University of California, Davis |
| ST000117 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family GC-MS (Part 1) | Salmonella enterica | University of California, Davis |
| ST000118 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family GCMS (part 2) | Escherichia coli | University of California, Davis |
| ST000118 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family GCMS (part 2) | Salmonella enterica | University of California, Davis |
| ST000119 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family LCMS | Escherichia coli | University of California, Davis |
| ST000119 | Metabolomics analysis of multiple metabolic functions in the YjgF/YER057c/UK114 (Rid) protein family LCMS | Salmonella enterica | University of California, Davis |
| ST000173 | Comparative metabolomics study of WT and iButOH tolerant E. coli | Escherichia coli | University of Michigan |
| ST000234 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv1130 | M. tuberculosis | Weill Cornell Medicine |
| ST000247 | Determining the metabolic profile of wildtype and nos mutant Staphylococcus aureus grown in media lacking glucose using targeted LC/MS | Staphylococcus aureus | University of Florida |
| ST000262 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv1713 | M. tuberculosis | Weill Cornell Medicine |
| ST000263 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv1016 | M. tuberculosis | Weill Cornell Medicine |
| ST000264 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3280 | M. tuberculosis | Weill Cornell Medicine |
| ST000265 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3244 | M. tuberculosis | Weill Cornell Medicine |
| ST000266 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3801 | M. tuberculosis | Weill Cornell Medicine |
| ST000267 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3722c | M. tuberculosis | Weill Cornell Medicine |
| ST000268 | Activity-Based Metabolic Profiling of M. tuberculosis H37Rv Rv3311 | M. tuberculosis | Weill Cornell Medicine |
| ST000309 | Metabolome of three Vancomycin-intermediate Staphylococcus aureus (VISA) mutants compared with the parent strain MM66 | Staphylococcus aureus | Oklahoma State University |
| ST000317 | Role of medium in bacterial growth | Bacteria | University of California, Davis |
| ST000318 | Allantoin differences in Synechococcus cells grown in high versus low lightgrowth | Synechococcus | University of California, Davis |
| ST000326 | Role of medium in bacterial growth (HILIC chromatography) | Bacteria | University of California, Davis |
| ST000351 | Determining the metabolic profile of wildtype, lrgAB, and atlA mutant Steptococcus mutans grown aerobically and anaerobically | Streptococcus mutans | University of Florida |
| ST000384 | Metabolomic profiles in P. gingivalis cells treated with pABA | Porphyromonas gingivalis | Osaka University |
| ST000394 | The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth (part I) | Synechococcus elongatus | University of California, Davis |
| ST000395 | The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth (part II) | Synechococcus elongatus | University of California, Davis |
| ST000416 | Armpit Biodiversity Metabolites and Odors | Human | University of North Carolina |
| ST000446 | Heterologous expression and detection of Apratoxins in E. coli | Escherichia coli | University of Florida |
| ST000449 | Molecular Imaging of Growth, Metabolism, and Antibiotic Inhibition in Bacterial Colonies by Laser Ablation Electrospray Ionization Mass Spectrometry | Bacillus subtilis | George Washington University |
| ST000453 | Metabolic Adaptation of Staphylococcus aureus to Host Immunity | Staphylococcus aureus | University of North Carolina |
| ST000466 | Streptococcus mutans organic acids/amino acid profiles, effect of oxidative stress; pilot | Streptococcus mutans | University of Florida |
| ST000468 | Enterococcus faecalis nucleotide profiles following mupirocin or decoyinine | Enterococcus faecalis | University of Florida |
| ST000469 | Enterococcus faecalis nucleotide profiles - pilot | Enterococcus faecalis | University of Florida |
| ST000569 | Effect of minimal and complex media on the metabolite profiles | Saccharomyces cerevisiae | Korea University |
| ST000572 | Metabolomics of Shark Bay stromatolites | Bacteria | University of Florida |
| ST000692 | Metabolites produced by strains associated with inflammation | Treponema | University of Michigan |
| ST000887 | Evaluation of Quenching and Extraction Procedures for Performing Metabolomics in Acidithiobacillus ferrooxidans | Acidithiobacillus | Laurentian University |
| ST001057 | Metabolite Extractions from Cyanobacteria | Synechococcus | Indian Institute of Technology Bombay |
| ST001080 | Dynamic labeling of intracellular metabolites in PCC 7002 | Synechococcus | Indian Institute of Technology Bombay |
| ST001119 | Quantification of microenvironmental metabolites in murine cancers reveals determinants of tumor nutrient availability | Mouse | University of Chicago |
| ST001125 | WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media (part I) | Bacteroides ovatus | Broad Institute of MIT and Harvard |
| ST001125 | WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media (part I) | Bacteroides thetaiotaomicron | Broad Institute of MIT and Harvard |
| ST001126 | WT and ΔSPT cultures of B. thetaiotaomicron grown in Minimal Media (part II) | Bacteroides thetaiotaomicron | Broad Institute of MIT and Harvard |
| ST001128 | WT and ΔSPT cultures of B. thetaiotaomicron grown in Minimal Media with or without d4-alanine (part IV) | Bacteroides thetaiotaomicron | Broad Institute of MIT and Harvard |
| ST001174 | Role of ClpCP in respiratory and fermentative growth | Staphylococcus aureus | Montana State University |
| ST001195 | Non-targeted GC-MS Analysis of Polar Soluble Fraction (part-I) | Synechococcus | Colorado State University |
| ST001196 | Non-targeted GC-MS Analysis of Insoluble Metabolites (part-II) | Synechococcus | Colorado State University |
| ST001197 | GC-MS Analysis of Insoluble/Polymeric Amino Acids (part-III) | Synechococcus | Colorado State University |
| ST001198 | Targeted LC-MS/MS Analysis of Soluble Metabolites in the MeOH:H2O Phase (part-IV) | Synechococcus | Colorado State University |
| ST001199 | Non-targeted LC-MS Analysis of Soluble Metabolites in the Non-Polar MTBE Phase (part-V) | Synechococcus | Colorado State University |
| ST001244 | Uropathogenic versus Urocolonizing Escherichia coli | Escherichia coli | Vanderbilt University |
| ST001260 | Metabolic changes of Fusobacterium nucleatum when co-cultured with other oral microbes (part-I) | Fusobacterium nucleatum | Osaka University |
| ST001261 | Metabolic changes of culture supernatants of Fusobacterium nucleatum co-cultured with other oral microbes (part-II) | Fusobacterium nucleatum | Osaka University |
| ST001263 | Metabolomic Profiling of Oxalate-Degrading Probiotic Lactobacillus acidophilus and Lactobacillus gasseri | Lactobacillus | University of Florida |
| ST001298 | Metabolome Profiling of Synechococcus elongatus PCC 11801 strains engineered for Succinate Production | Synechococcus elongatus | Indian Institute of Technology Bombay |
| ST001302 | Metabolome Profiling of a Fast-growing Cyanobacterium Synechococcus elongatus PCC 11801 under Diurnal Cycle | Synechococcus | Indian Institute of Technology Bombay |
| ST001305 | Integrated Metabolomics and Transcriptomics Suggest the Global Metabolic Response to 2-Aminoacrylate Stress in Salmonella enterica | Salmonella enterica | University of Georgia |
| ST001308 | 1H NMR metabolomics corroborates serine hydroxymethyltransferase as the primary target of 2-aminoacrylate in a ridA mutant of Salmonella enterica | Salmonella enterica | University of Georgia |
| ST001321 | Metabolomics in Escherichia coli mutant strains | Escherichia coli | Manchester Institute of Biotechnology, University of Manchester |
| ST001351 | NMR Metabolomic Analysis of Bacterial Resistance Pathways Using Multivalent Quaternary Ammonium Functionalized Macromolecules | Escherichia coli | Montana State University |
| ST001382 | Distinct metabolic states of a cell guide alternate fates of mutational buffering through altered proteostasis | Escherichia coli | CSIR-National Chemical Laboratory |
| ST001394 | Metabolomic study of Escherichia coli K-12 MG1655 and mutants | Escherichia coli | IIT Bombay |
| ST001414 | Pseudomonas aeruginosa cystic fibrosis clinical isolates volatile metabolomics | Pseudomonas aeruginosa | Arizona State University |
| ST001421 | Metabolomic study of Escherichia coli K-12 MG1655 WT and its transcriptional regulator mutants under anaerobic fermentation conditions | Escherichia coli | IIT Bombay |
| ST001426 | Dependence of the Staphylococcal Volatilome Composition on Microbial Nutrition | Staphylococcus epidermidis | Arizona State University |
| ST001433 | Evidence for proline utilisation by oral bacterial biofilms grown in saliva | Bacteria | King's College London |
| ST001496 | Application of developed quantatation method | Bacteria | Helmholtz Centre for Environmental Research |
| ST001511 | Symbiotic bacteria-derived organic acids | Bacteria | Qilu University of Technology (Shandong Academy of Sciences) |
| ST001608 | Comparing gas chromatography with time-of-flight, quadrupole time-of-flight and quadrupole mass spectrometry for stable isotope tracing (part-I) | Rothia | University of California, Davis |
| ST001613 | Comparing gas chromatography with time-of-flight, quadrupole time-of-light and quadrupole mass spectrometry for stable isotope tracing (part-II) | Rothia | University of California, Davis |
| ST001657 | E.coli K-12 treated by IPL_analysis of organic phase | Escherichia coli | University of Minnesota |
| ST001663 | E.coli K-12 treated by IPL - analysis of polar phase (part-I) | Escherichia coli | University of Minnesota |
| ST001664 | E.coli K-12 treated by IPL - analysis of polar phase (part-II) | Escherichia coli | University of Minnesota |
| ST001671 | A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism | Bacteria | Stanford University |
| ST001688 | A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism (part-II) | Bacteria | Stanford University |
| ST001752 | Dual RNA regulator VcdRP in V. cholerae modulates central metabolism | Vibrio cholerae | Helmholtz Centre for Environmental Research |
| ST001852 | Screening of unique bile acid metabolizing bacteria | Bacteria | Keio University School of Medicine |
| ST001862 | Cross-feeding between intestinal pathobionts promotes their overgrowth during undernutrition | Bacteria | University of British Columbia |
| ST001904 | Lipidomics analysis of outer membrane vesicles and elucidation of the ceramide phosphoinositol biosynthetic pathway in Bacteroides thetaiotaomicron | Bacteroides thetaiotaomicron | Washington University in St. Louis |
| ST001956 | Timecourse exometabolome analysis of glucose grown Rubrivivax benzoatilyticus cells | Rubrivivax benzoatilyticus | University of Hyderabad |
| ST001966 | NMR Hydrophilic Metabolomic Analysis of Bacterial Resistance Pathways using Multivalent Antimicrobials with Challenged and Unchallenged Wild Type and Mutated Gram Positive Bacteria | Bacillus cereus | Montana State University |
| ST001980 | Metabolomic profiles in S. mutans, S. gordonii, and S. oralis cells treated with D-tagatose | Streptococcus | Osaka University |
| ST001987 | Transcriptomic and lipidomic analysis unravels the response of Faecalibacterium prausnitzii to calcium palmitate | Faecalibacterium prausnitzii | University of Groningen |
| ST001994 | Mutasynthetic production and antimicrobial characterisation of Darobactin darobactin analogs (NMR analysis) | Escherichia coli | Justus-Liebig-University Giessen |
| ST001995 | Mutasynthetic production and antimicrobial characterisation of Darobactin darobactin analogs (MS analysis) | Escherichia coli | Justus-Liebig-University Giessen |
| ST002014 | Impact of microcin J25 on the porcine microbiome in a continuous culture model | Swine colonic microbiota | National Museum of Natural History |
| ST002076 | Metabolomic study of Escherichia coli K-12 MG1655 WT and its transcriptional regulator double mutants under anaerobic fermentation conditions | Escherichia coli | IIT Bombay |
| ST002128 | Discovery and characterization of virulence associated functional metabolites in Escherichia coli based on functional metabolomics strategy(siderophores metabolomics-1) | Escherichia coli | Shanghai Center for Systems Biomedicine, Shanghai Jiaotong University |
| ST002129 | Discovery and characterization of virulence associated functional metabolites in Escherichia coli based on functional metabolomics strategy(siderophores metabolomics-2) | Escherichia coli | Shanghai Center for Systems Biomedicine, Shanghai Jiaotong University |
| ST002130 | Discovery and characterization of virulence associated functional metabolites in Escherichia coli based on functional metabolomics strategy（pellets metabolomics-1） | Escherichia coli | Shanghai Center for Systems Biomedicine, Shanghai Jiaotong University |
| ST002131 | Discovery and characterization of virulence associated functional metabolites in Escherichia coli based on functional metabolomics strategy（pellets metabolomics-2） | Escherichia coli | Shanghai Center for Systems Biomedicine, Shanghai Jiaotong University |
| ST002187 | Interplay of CodY and CcpA in regulating central metabolism and biofilm formation in S. aureus | Staphylococcus aureus | University of Nebraska Medical Center |
| ST002245 | Deciphering the metabolomic differences between two fast-growing cyanobacteria, S.elongatus PCC 11801 and 11802 via metabolite profiling | Synechococcus elongatus | Indian Institute of Technology Bombay |
| ST002287 | Enhanced systemic commensal E. coli immunogenicity through minor alteration of the metabolic profile | Escherichia coli | University of Calgary |
| ST002289 | Map of microbially induced metabolic changes across diverse body sites in mice - Bacterial culture data | Bacteria | University of Calgary |
| ST002306 | Metabolomics profiling of full extracts of bacterial culture supernatants. | Bacillus megaterium | University of Connecticut |
| ST002306 | Metabolomics profiling of full extracts of bacterial culture supernatants. | Enterococcus faecium | University of Connecticut |
| ST002307 | Metabolomics profiling of the secondary fractions 4 of bacterial culture supernatants. | Bacillus megaterium | University of Connecticut |
| ST002307 | Metabolomics profiling of the secondary fractions 4 of bacterial culture supernatants. | Enterococcus faecium | University of Connecticut |
| ST002308 | Metabolomics profiling of full extracts and fractions of bacterial culture supernatants. | Multiple bacterial species | University of Connecticut |
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