Summary of Study ST003190
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001986. The data can be accessed directly via it's Project DOI: 10.21228/M81142 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST003190 |
| Study Title | A clade of receptor-like cytoplasmic kinases and 14-3-3 proteins coordinate the inositol hexaphosphate accumulation |
| Study Summary | Inositol hexaphosphate (InsP6) is the major storage form of phosphorus in seeds. Reducing seed InsP6 content is a breeding objective in agriculture, as InsP6 negatively impacts animal nutrition and the environment. Nevertheless, how InsP6 accumulation is regulated remains largely unknown. Here, we identify a clade of receptor-like cytoplasmic kinases (RLCKs), named Inositol Polyphosphate-related Cytoplasmic Kinases 1-6 (IPCK1-IPCK6), deeply involved in InsP6 accumulation. The InsP6 concentration is dramatically reduced in seeds of ipck quadruple (T-4m/C-4m) and quintuple (C-5m) mutants, accompanied with the obviously increase of phosphate (Pi) concentration. The plasma membrane-localized IPCKs recruit IPK1 involved in InsP6 synthesis, and facilitate its binding and activity via phosphorylation of GRF 14-3-3 proteins. IPCKs also recruit IPK2s and PI-PLCs required for InsP4/InsP5 and InsP3 biosynthesis respectively, to form a potential IPCK-GRF-PLC-IPK2-IPK1 complex. Our findings therefore uncover a previously uncharacterized regulatory mechanism of InsP6 accumulation governed by IPCKs, shedding new light on the mechanisms of InsP biosynthesis in eukaryotes. |
| Institute | Zhejiang University |
| Last Name | XU |
| First Name | LILIN |
| Address | zhejiang university |
| 1164702127@qq.com | |
| Phone | 18667919279 |
| Submit Date | 2024-04-28 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | .xml |
| Analysis Type Detail | Other |
| Release Date | 2024-05-08 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Plant; Subject species: Arabidopsis thaliana (Factor headings shown in green)
| mb_sample_id | local_sample_id | Sample source | Treatment |
|---|---|---|---|
| SA347864 | WT-IP5-Fig2f | Plant Seed | Control |
| SA347865 | WT-IP3-FigS2b | Plant Seed | Control |
| SA347866 | WT-IP8-FigS2b | Plant Seed | Control |
| SA347867 | WT-IP6-Fig2f | Plant Seed | Control |
| SA347868 | WT-IP7-FigS2b | Plant Seed | Control |
| SA347869 | WT-IP4-FigS2b | Plant Seed | Control |
| SA347870 | WT-IP5-FigS2b | Plant Seed | Control |
| SA347871 | WT-IP6-FigS2b | Plant Seed | Control |
| SA347872 | C-5m-2-IP7-FigS2b | Plant Seed | mutant |
| SA347873 | C-5m-2-IP6-FigS2b | Plant Seed | mutant |
| SA347874 | C-5m-2-IP5-FigS2b | Plant Seed | mutant |
| SA347875 | C-5m-2-IP5-Fig2f | Plant Seed | mutant |
| SA347876 | C-5m-2-IP4-FigS2b | Plant Seed | mutant |
| SA347877 | C-5m-2-IP6-Fig2f | Plant Seed | mutant |
| SA347878 | C-5m-2-IP8-FigS2b | Plant Seed | mutant |
| SA347879 | C-5m-1-IP7-FigS2b | Plant Seed | mutant |
| SA347880 | C-5m-1-IP5-FigS2b | Plant Seed | mutant |
| SA347881 | C-5m-1-IP4-FigS2b | Plant Seed | mutant |
| SA347882 | C-5m-1-IP3-FigS2b | Plant Seed | mutant |
| SA347883 | C-5m-1-IP6-FigS2b | Plant Seed | mutant |
| SA347884 | C-5m-1-IP8-FigS2b | Plant Seed | mutant |
| SA347885 | C-5m-1-IP6-Fig2f | Plant Seed | mutant |
| SA347886 | C-5m-1-IP5-Fig2f | Plant Seed | mutant |
| SA347887 | C-5m-2-IP3-FigS2b | Plant Seed | mutant |
| Showing results 1 to 24 of 24 |
