Summary of Study ST000758
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000547. The data can be accessed directly via it's Project DOI: 10.21228/M8ZH48 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST000758 |
Study Title | Effects of caloric restriction in HCR/LCR rats |
Study Type | MS analysis |
Study Summary | One year caloric restriction (CR) compared to ad lib (AL) feeding on metabolic and clinical parameters to assess association with intrinsic oxidative capacity. High and low capacity running rats (HCR and LCR) were randomized to ad lib feeding vs. 40% caloric restriction starting at 8 weeks of age. Experiment was continued for 52 weeks when blood and tissue were collected. Exercise capacity, CLAMS assessment of fuel utilization and clinical parameters were determined at 8 weeks, 8 months and 12 months of age. Tissue was collected in the fed (2 hours after re-feeding) or fasted stated all groups. |
Institute | University of Michigan |
Department | Biomedical Research Core Facilities |
Laboratory | Metabolomics core |
Last Name | Kachman |
First Name | Maureen |
Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
mkachman@med.umich.edu | |
Phone | (734) 232-8175 |
Submit Date | 2017-06-19 |
Num Groups | 7 |
Total Subjects | 5 |
Raw Data Available | Yes |
Raw Data File Type(s) | wiff |
Analysis Type Detail | LC-MS |
Release Date | 2017-12-06 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
Project ID: | PR000547 |
Project DOI: | doi: 10.21228/M8ZH48 |
Project Title: | Caloric Restriction and Oxidative capactiy in rats |
Project Type: | MS analysis |
Project Summary: | One year caloric restriction compared to ad lib feeding on metabolic and clinical parameters to assess association with intrinsic oxidative capacity |
Institute: | University of Michigan |
Department: | Internal Medicine |
Laboratory: | Burant Lab |
Last Name: | Burant |
First Name: | Chuck |
Address: | 1500 E. Medical Center Drive Ann Arbor, MI 48109 |
Email: | burantc@umich.edu |
Phone: | 734 615-3481 |
Subject:
Subject ID: | SU000781 |
Subject Type: | Rat |
Subject Species: | Rattus norvegicus |
Taxonomy ID: | 10116 |
Species Group: | Mammal |
Factors:
Subject type: Rat; Subject species: Rattus norvegicus (Factor headings shown in green)
mb_sample_id | local_sample_id | Feeding | Group |
---|---|---|---|
SA041612 | S00018548 | Fast | HCR-AL |
SA041613 | S00018549 | Fast | HCR-AL |
SA041614 | S00018550 | Fast | HCR-AL |
SA041615 | S00018551 | Fast | HCR-AL |
SA041616 | S00018552 | Fast | HCR-AL |
SA041617 | S00018571 | Fast | HCR-CR |
SA041618 | S00018570 | Fast | HCR-CR |
SA041619 | S00018573 | Fast | HCR-CR |
SA041620 | S00018572 | Fast | HCR-CR |
SA041621 | S00018574 | Fast | HCR-CR |
SA041622 | S00018575 | Fast | HCR-CR |
SA041623 | S00018538 | Fast | LCR-AL |
SA041624 | S00018537 | Fast | LCR-AL |
SA041625 | S00018536 | Fast | LCR-AL |
SA041626 | S00018539 | Fast | LCR-AL |
SA041627 | S00018540 | Fast | LCR-AL |
SA041628 | S00018541 | Fast | LCR-AL |
SA041629 | S00018560 | Fast | LCR-CR |
SA041630 | S00018561 | Fast | LCR-CR |
SA041631 | S00018563 | Fast | LCR-CR |
SA041632 | S00018562 | Fast | LCR-CR |
SA041633 | S00018559 | Fast | LCR-CR |
SA041634 | S00018558 | Fast | LCR-CR |
SA041635 | S00018553 | Fed | HCR-AL |
SA041636 | S00018555 | Fed | HCR-AL |
SA041637 | S00018554 | Fed | HCR-AL |
SA041638 | S00018557 | Fed | HCR-AL |
SA041639 | S00018556 | Fed | HCR-AL |
SA041640 | S00018577 | Fed | HCR-CR |
SA041641 | S00018576 | Fed | HCR-CR |
SA041642 | S00018578 | Fed | HCR-CR |
SA041643 | S00018580 | Fed | HCR-CR |
SA041644 | S00018579 | Fed | HCR-CR |
SA041645 | S00018581 | Fed | HCR-CR |
SA041646 | S00018543 | Fed | LCR-AL |
SA041647 | S00018542 | Fed | LCR-AL |
SA041648 | S00018544 | Fed | LCR-AL |
SA041649 | S00018547 | Fed | LCR-AL |
SA041650 | S00018545 | Fed | LCR-AL |
SA041651 | S00018546 | Fed | LCR-AL |
SA041652 | S00018565 | Fed | LCR-CR |
SA041653 | S00018564 | Fed | LCR-CR |
SA041654 | S00018566 | Fed | LCR-CR |
SA041655 | S00018567 | Fed | LCR-CR |
SA041656 | S00018568 | Fed | LCR-CR |
SA041657 | S00018569 | Fed | LCR-CR |
SA041658 | S00020152 | Pooled plasma | Pooled plasma |
Showing results 1 to 47 of 47 |
Collection:
Collection ID: | CO000775 |
Collection Summary: | - |
Treatment:
Treatment ID: | TR000795 |
Treatment Summary: | - |
Sample Preparation:
Sampleprep ID: | SP000788 |
Sampleprep Summary: | - |
Sampleprep Protocol Filename: | A003_-_Untargeted_Metabolomics.pdf |
Combined analysis:
Analysis ID | AN001190 | AN001191 | AN001192 | AN001193 |
---|---|---|---|---|
Analysis type | MS | MS | MS | MS |
Chromatography type | Reversed phase | Reversed phase | Reversed phase | Reversed phase |
Chromatography system | Agilent | Agilent | Shimadzu CTO-20A Nexera X2 | Shimadzu CTO-20A Nexera X2 |
Column | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
MS Type | ESI | ESI | ESI | ESI |
MS instrument type | QTOF | QTOF | Triple TOF | Triple TOF |
MS instrument name | Agilent 6530 QTOF | Agilent 6530 QTOF | ABI Sciex 5600+ TripleTOF | ABI Sciex 5600+ TripleTOF |
Ion Mode | NEGATIVE | POSITIVE | NEGATIVE | POSITIVE |
Units | peak area | peak area | peak area normalized | peak area normalized |
Chromatography:
Chromatography ID: | CH000835 |
Instrument Name: | Agilent |
Column Name: | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
Chromatography Type: | Reversed phase |
Chromatography ID: | CH000836 |
Instrument Name: | Shimadzu CTO-20A Nexera X2 |
Column Name: | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
Column Temperature: | 55 |
Flow Rate: | 0.400uL/min |
Solvent A: | 40% acetonitrile/60% water; 10 mM ammonium acetate |
Solvent B: | 10% acetonitrile/5% water/85% isopropanol; 10 mM ammonium acetate |
Chromatography Type: | Reversed phase |
MS:
MS ID: | MS001085 |
Analysis ID: | AN001190 |
Instrument Name: | Agilent 6530 QTOF |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Analysis Protocol File: | A003_-_Untargeted_Metabolomics.pdf |
MS ID: | MS001086 |
Analysis ID: | AN001191 |
Instrument Name: | Agilent 6530 QTOF |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Analysis Protocol File: | A003_-_Untargeted_Metabolomics.pdf |
MS ID: | MS001087 |
Analysis ID: | AN001192 |
Instrument Name: | ABI Sciex 5600+ TripleTOF |
Instrument Type: | Triple TOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Analysis Protocol File: | A004_-_Shotgun_Lipidomics.pdf |
MS ID: | MS001088 |
Analysis ID: | AN001193 |
Instrument Name: | ABI Sciex 5600+ TripleTOF |
Instrument Type: | Triple TOF |
MS Type: | ESI |
Ion Mode: | POSITIVE |
Analysis Protocol File: | A004_-_Shotgun_Lipidomics.pdf |