Summary of Study ST001811
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001145. The data can be accessed directly via it's Project DOI: 10.21228/M8Q12H This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001811 |
Study Title | Evidence that class I glutamine amidotransferase, GAT1_2.1, acts as a glutaminase in roots of Arabidopsis thaliana |
Study Type | Targeted Metabolite Quantification |
Study Summary | In this study, we use a targeted metabolite quantification approach to demonstrate the difference in quantities of pathway intermediates between wild type Arabidopsis roots and gat1_2.1 mutants using glutamine as organic nitrogen treatment and KNO3 and Glu treatments as negative and positive controls, respectively. |
Institute | Agriculture and Agri-Food Canada |
Department | London Research and Development Centre |
Laboratory | Frederic Marsolais |
Last Name | Kambhampati |
First Name | Shrikaar |
Address | 1391 Sandford St, London, ON N5V 4T3, Canada |
shrikaar.k@gmail.com | |
Phone | 3144025550 |
Submit Date | 2021-06-01 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2021-06-16 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Plant; Subject species: Arabidopsis thaliana (Factor headings shown in green)
mb_sample_id | local_sample_id | Raw file name | SampleType | Genotype |
---|---|---|---|---|
SA168210 | AA-CS1-PRM | AA-CS1-PRM | Amino acid standard | Standard |
SA168211 | AA-CS2-PRM | AA-CS2-PRM | Amino acid standard | Standard |
SA168212 | AA-CS3-PRM | AA-CS3-PRM | Amino acid standard | Standard |
SA168213 | AA-CS4-PRM | AA-CS4-PRM | Amino acid standard | Standard |
SA168214 | AA-CS5-PRM | AA-CS5-PRM | Amino acid standard | Standard |
SA168215 | AA-CS6-PRM | AA-CS6-PRM | Amino acid standard | Standard |
SA168216 | GAT-GLN-1-neg-PRM | GAT-GLN-1-neg-PRM | Negative Control | gat1_2.1 |
SA168217 | GAT-GLN-1-pos-PRM | GAT-GLN-1-pos-PRM | Negative Control | gat1_2.1 |
SA168218 | GAT-GLN-2-neg-PRM | GAT-GLN-2-neg-PRM | Negative Control | gat1_2.1 |
SA168219 | GAT-GLN-2-pos-PRM | GAT-GLN-2-pos-PRM | Negative Control | gat1_2.1 |
SA168220 | GAT-GLN-3-neg-PRM | GAT-GLN-3-neg-PRM | Negative Control | gat1_2.1 |
SA168221 | GAT-GLN-3-pos-PRM | GAT-GLN-3-pos-PRM | Negative Control | gat1_2.1 |
SA168222 | GATp10GLN-1-neg-PRM | GATp10GLN-1-neg-PRM | Long Gln treatment | gat1_2.1 |
SA168223 | GATp10GLN-1-pos-PRM | GATp10GLN-1-pos-PRM | Long Gln treatment | gat1_2.1 |
SA168224 | GATp10GLN-2-neg-PRM | GATp10GLN-2-neg-PRM | Long Gln treatment | gat1_2.1 |
SA168225 | GATp10GLN-2-pos-PRM | GATp10GLN-2-pos-PRM | Long Gln treatment | gat1_2.1 |
SA168226 | GATp10GLN-3-neg-PRM | GATp10GLN-3-neg-PRM | Long Gln treatment | gat1_2.1 |
SA168227 | GATp10GLN-3-pos-PRM | GATp10GLN-3-pos-PRM | Long Gln treatment | gat1_2.1 |
SA168228 | GATp2GLN-1-neg-PRM | GATp2GLN-1-neg-PRM | Short Gln treatment | gat1_2.1 |
SA168229 | GATp2GLN-1-pos-PRM | GATp2GLN-1-pos-PRM | Short Gln treatment | gat1_2.1 |
SA168230 | GATp2GLN-2-neg-PRM | GATp2GLN-2-neg-PRM | Short Gln treatment | gat1_2.1 |
SA168231 | GATp2GLN-2-pos-PRM | GATp2GLN-2-pos-PRM | Short Gln treatment | gat1_2.1 |
SA168232 | GATp2GLN-3-neg-PRM | GATp2GLN-3-neg-PRM | Short Gln treatment | gat1_2.1 |
SA168233 | GATp2GLN-3-pos-PRM | GATp2GLN-3-pos-PRM | Short Gln treatment | gat1_2.1 |
SA168234 | GATp2GLU-1-neg-PRM | GATp2GLU-1-neg-PRM | Positive Control | gat1_2.1 |
SA168235 | GATp2GLU-1-pos-PRM | GATp2GLU-1-pos-PRM | Positive Control | gat1_2.1 |
SA168236 | GATp2GLU-2-neg-PRM | GATp2GLU-2-neg-PRM | Positive Control | gat1_2.1 |
SA168237 | GATp2GLU-2-pos-PRM | GATp2GLU-2-pos-PRM | Positive Control | gat1_2.1 |
SA168238 | GATp2GLU-3-neg-PRM | GATp2GLU-3-neg-PRM | Positive Control | gat1_2.1 |
SA168239 | GATp2GLU-3-pos-PRM | GATp2GLU-3-pos-PRM | Positive Control | gat1_2.1 |
SA168240 | OA-CS1-PRM | OA-CS1-PRM | Organic acid standard | Standard |
SA168241 | OA-CS2-PRM | OA-CS2-PRM | Organic acid standard | Standard |
SA168242 | OA-CS3-PRM | OA-CS3-PRM | Organic acid standard | Standard |
SA168243 | OA-CS4-PRM | OA-CS4-PRM | Organic acid standard | Standard |
SA168244 | OA-CS5-PRM | OA-CS5-PRM | Organic acid standard | Standard |
SA168245 | OA-CS6-PRM | OA-CS6-PRM | Organic acid standard | Standard |
SA168246 | WT-GLN-1-neg-PRM | WT-GLN-1-neg-PRM | Negative Control | Wildtype |
SA168247 | WT-GLN-1-pos-PRM | WT-GLN-1-pos-PRM | Negative Control | Wildtype |
SA168248 | WT-GLN-2-neg-PRM | WT-GLN-2-neg-PRM | Negative Control | Wildtype |
SA168249 | WT-GLN-2-pos-PRM | WT-GLN-2-pos-PRM | Negative Control | Wildtype |
SA168250 | WT-GLN-3-neg-PRM | WT-GLN-3-neg-PRM | Negative Control | Wildtype |
SA168251 | WT-GLN-3-pos-PRM | WT-GLN-3-pos-PRM | Negative Control | Wildtype |
SA168252 | WTp10GLN-1-neg-PRM | WTp10GLN-1-neg-PRM | Long Gln treatment | Wildtype |
SA168253 | WTp10GLN-1-pos-PRM | WTp10GLN-1-pos-PRM | Long Gln treatment | Wildtype |
SA168254 | WTp10GLN-2-neg-PRM | WTp10GLN-2-neg-PRM | Long Gln treatment | Wildtype |
SA168255 | WTp10GLN-2-pos-PRM | WTp10GLN-2-pos-PRM | Long Gln treatment | Wildtype |
SA168256 | WTp10GLN-3-neg-PRM | WTp10GLN-3-neg-PRM | Long Gln treatment | Wildtype |
SA168257 | WTp10GLN-3-pos-PRM | WTp10GLN-3-pos-PRM | Long Gln treatment | Wildtype |
SA168258 | WTp2GLN-1-neg-PRM | WTp2GLN-1-neg-PRM | Short Gln treatment | Wildtype |
SA168259 | WTp2GLN-1-pos-PRM | WTp2GLN-1-pos-PRM | Short Gln treatment | Wildtype |
SA168260 | WTp2GLN-2-neg-PRM | WTp2GLN-2-neg-PRM | Short Gln treatment | Wildtype |
SA168261 | WTp2GLN-2-pos-PRM | WTp2GLN-2-pos-PRM | Short Gln treatment | Wildtype |
SA168262 | WTp2GLN-3-neg-PRM | WTp2GLN-3-neg-PRM | Short Gln treatment | Wildtype |
SA168263 | WTp2GLN-3-pos-PRM | WTp2GLN-3-pos-PRM | Short Gln treatment | Wildtype |
SA168264 | WTp2GLU-1-neg-PRM | WTp2GLU-1-neg-PRM | Positive Control | Wildtype |
SA168265 | WTp2GLU-1-pos-PRM | WTp2GLU-1-pos-PRM | Positive Control | Wildtype |
SA168266 | WTp2GLU-2-neg-PRM | WTp2GLU-2-neg-PRM | Positive Control | Wildtype |
SA168267 | WTp2GLU-2-pos-PRM | WTp2GLU-2-pos-PRM | Positive Control | Wildtype |
SA168268 | WTp2GLU-3-neg-PRM | WTp2GLU-3-neg-PRM | Positive Control | Wildtype |
SA168269 | WTp2GLU-3-pos-PRM | WTp2GLU-3-pos-PRM | Positive Control | Wildtype |
Showing results 1 to 60 of 60 |