Summary of Study ST002289
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001468. The data can be accessed directly via it's Project DOI: 10.21228/M8ZT5R This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST002289 |
| Study Title | Map of microbially induced metabolic changes across diverse body sites in mice - Bacterial culture data |
| Study Summary | Metabolite profiles of culture supernatants from individual commensal bacteria isolated from the intestine of mice. |
| Institute | University of Calgary |
| Department | Physiology and Pharmacology |
| Laboratory | McCoy |
| Last Name | BROWN |
| First Name | KIRSTY |
| Address | 3330 Hospital Dr NW |
| kirsty.brown1@ucalgary.ca | |
| Phone | 2508692232 |
| Submit Date | 2022-05-26 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzXML |
| Analysis Type Detail | LC-MS |
| Release Date | 2023-02-05 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN003741 |
|---|---|
| Analysis type | MS |
| Chromatography type | HILIC |
| Chromatography system | Thermo Vanquish |
| Column | Thermo Syncronis HILIC (100 x 2.1mm,1.7um) |
| MS Type | ESI |
| MS instrument type | Orbitrap |
| MS instrument name | Thermo Q Exactive HF hybrid Orbitrap |
| Ion Mode | NEGATIVE |
| Units | AUC |
Chromatography:
| Chromatography ID: | CH002772 |
| Methods Filename: | culture_protocol_kb.docx |
| Instrument Name: | Thermo Vanquish |
| Column Name: | Thermo Syncronis HILIC (100 x 2.1mm,1.7um) |
| Column Temperature: | 30C |
| Flow Gradient: | 2 stage linear gradient |
| Flow Rate: | 600uL/min |
| Sample Injection: | 2uL |
| Solvent A: | 100% water; 20 mM ammonium formate, pH 3 |
| Solvent B: | 100% acetonitrile; 0.1% formic acid |
| Analytical Time: | 15 minutes |
| Washing Buffer: | 10% MeOH in H2O + 0.1% formic acid |
| Target Sample Temperature: | 4 |
| Chromatography Type: | HILIC |
