Summary of Study ST001154
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000773. The data can be accessed directly via it's Project DOI: 10.21228/M8RT1C This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001154 |
| Study Title | A comprehensive plasma metabolomics dataset for a cohort of mouse knockouts within the International Mouse Phenotyping Consortium |
| Study Summary | Untargeted and targeted metabolomics datasets were acquired for blood plasma samples of 30 mouse knockouts within the International Mouse Phenotyping Consortium (IMPC). http://www.mousephenotype.org/. West Coast Metabolomics Center at UC Davis (https://metabolomics.ucdavis.edu/) conducted the metabolomics analyses. |
| Institute | University of California, Davis |
| Department | Genome Center |
| Laboratory | West Coast Metabolomics Center |
| Last Name | Barupal |
| First Name | Dinesh |
| Address | 451 East Health Science Drive |
| dinkumar@ucdavis.edu | |
| Phone | 5309794354 |
| Submit Date | 2019-03-12 |
| Num Groups | 31 |
| Total Subjects | 220 |
| Num Males | 110 |
| Num Females | 110 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | cdf, raw(Thermo), mzML |
| Analysis Type Detail | GC-MS/LC-MS |
| Release Date | 2019-04-12 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Genotype |
|---|---|---|
| SA081280 | 215989_027 | A2m |
| SA081281 | 204770_025 | A2m |
| SA081282 | 216077_028 | A2m |
| SA081283 | 204771_026 | A2m |
| SA081284 | 216079_029 | A2m |
| SA081285 | 216080_030 | A2m |
| SA081286 | 190365_065 | Ahcy |
| SA081287 | 190372_066 | Ahcy |
| SA081288 | 181061_064 | Ahcy |
| SA081289 | 180957_062 | Ahcy |
| SA081290 | 180958_063 | Ahcy |
| SA081291 | 180956_061 | Ahcy |
| SA081292 | 123951_017 | Atp5b |
| SA081293 | 144064_016 | Atp5b |
| SA081294 | 123953_018 | Atp5b |
| SA081295 | 143866_013 | Atp5b |
| SA081296 | 143869_015 | Atp5b |
| SA081297 | 143867_014 | Atp5b |
| SA081298 | 296501_122 | Atp6v0d1 |
| SA081299 | 296503_123 | Atp6v0d1 |
| SA081300 | 254467_124 | Atp6v0d1 |
| SA081301 | 254470_126 | Atp6v0d1 |
| SA081302 | 254468_125 | Atp6v0d1 |
| SA081303 | 296500_121 | Atp6v0d1 |
| SA081304 | 224106_041 | C8a |
| SA081305 | 222899_040 | C8a |
| SA081306 | 257445_039 | C8a |
| SA081307 | 257443_038 | C8a |
| SA081308 | 224107_042 | C8a |
| SA081309 | 233525_037 | C8a |
| SA081310 | 217741_113 | Cdk4 |
| SA081311 | 206819_112 | Cdk4 |
| SA081312 | 206925_110 | Cdk4 |
| SA081313 | 206923_109 | Cdk4 |
| SA081314 | 217742_114 | Cdk4 |
| SA081315 | 209532_111 | Cdk4 |
| SA081316 | 125374_053 | Dhfr |
| SA081317 | 129283_049 | Dhfr |
| SA081318 | 122070_052 | Dhfr |
| SA081319 | 129286_051 | Dhfr |
| SA081320 | 129285_050 | Dhfr |
| SA081321 | 125375_054 | Dhfr |
| SA081322 | 424983_127 | Dync1li1 |
| SA081323 | 447116_132 | Dync1li1 |
| SA081324 | 447115_131 | Dync1li1 |
| SA081325 | 428092_130 | Dync1li1 |
| SA081326 | 424984_128 | Dync1li1 |
| SA081327 | 427987_129 | Dync1li1 |
| SA081328 | 410985_088 | G6pd2 |
| SA081329 | 430037_089 | G6pd2 |
| SA081330 | 432863_090 | G6pd2 |
| SA081331 | 420424_085 | G6pd2 |
| SA081332 | 429932_086 | G6pd2 |
| SA081333 | 429948_087 | G6pd2 |
| SA081334 | 43709_043 | Galc |
| SA081335 | 40494_047 | Galc |
| SA081336 | 43712_045 | Galc |
| SA081337 | 40393_046 | Galc |
| SA081338 | 43711_044 | Galc |
| SA081339 | 40495_048 | Galc |
| SA081340 | 38379_094 | Gnpda1 |
| SA081341 | 40790_095 | Gnpda1 |
| SA081342 | 40681_092 | Gnpda1 |
| SA081343 | 40793_096 | Gnpda1 |
| SA081344 | 38276_091 | Gnpda1 |
| SA081345 | 40683_093 | Gnpda1 |
| SA081346 | 190701_012 | Idh1 |
| SA081347 | 138120_011 | Idh1 |
| SA081348 | 138110_010 | Idh1 |
| SA081349 | 115996_009 | Idh1 |
| SA081350 | 115900_008 | Idh1 |
| SA081351 | 185262_007 | Idh1 |
| SA081352 | 435798_023 | Iqgap1 |
| SA081353 | 487667_024 | Iqgap1 |
| SA081354 | 506107_022 | Iqgap1 |
| SA081355 | 493977_021 | Iqgap1 |
| SA081356 | 487464_019 | Iqgap1 |
| SA081357 | 487461_020 | Iqgap1 |
| SA081358 | 111495_100 | Lmbrd1 |
| SA081359 | 85376_099 | Lmbrd1 |
| SA081360 | 72465_097 | Lmbrd1 |
| SA081361 | 118598_101 | Lmbrd1 |
| SA081362 | 85374_098 | Lmbrd1 |
| SA081363 | 118599_102 | Lmbrd1 |
| SA081364 | 225110_035 | Mfap4 |
| SA081365 | 212480_032 | Mfap4 |
| SA081366 | 225109_034 | Mfap4 |
| SA081367 | 212477_031 | Mfap4 |
| SA081368 | 225111_036 | Mfap4 |
| SA081369 | 213386_033 | Mfap4 |
| SA081370 | 356268_074 | Mmachc |
| SA081371 | 356157_073 | Mmachc |
| SA081372 | 356272_075 | Mmachc |
| SA081373 | 356371_076 | Mmachc |
| SA081374 | 356475_077 | Mmachc |
| SA081375 | 356477_078 | Mmachc |
| SA081376 | 349944_156 | Mvk |
| SA081377 | 328199_155 | Mvk |
| SA081378 | 328195_154 | Mvk |
| SA081379 | 345321_152 | Mvk |
