Summary of Study ST001309

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000890. The data can be accessed directly via it's Project DOI: 10.21228/M8ND7K This work is supported by NIH grant, U2C- DK119886.

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Study IDST001309
Study TitleMetabolite expression in liver after early life exposure to an endocrine disruptor at 240 days postnatal (part-I)
Study TypeMetabolite expression after chemical exposure versus control.
Study SummaryOur early-life environment has a profound influence on developing organs that impact metabolic function and determines disease susceptibility across the life-course. Using a rat model for exposure to an endocrine disrupting chemical (EDC), we show that early-life exposure causes metabolic dysfunction in adulthood and reprograms histone marks in the developing liver to accelerate acquisition of an adult epigenomic signature. This epigenomic reprogramming persists long after the initial exposure, but many reprogrammed genes remain transcriptionally silent with their impact on metabolism not revealed until a later life exposure to a Western-style diet. Diet-dependent metabolic disruption was largely driven by reprogramming of the Early Growth Response 1 (EGR1) transcriptome and production of metabolites in pathways linked to cholesterol, lipid and one-carbon metabolism. These findings demonstrate the importance of epigenome: environment interactions, which early in life accelerate epigenomic aging, and later in adulthood unlock metabolically restricted epigenetic reprogramming to drive metabolic dysfunction.
Institute
Baylor College of Medicine
DepartmentMolecular and Cellular Biology
LaboratoryCenter for Precision Environmental Health
Last NameWalker
First NameCheryl
Address1 Baylor Plaza, Houston, TX, 77030, USA
EmailCheryl.walker@bcm.edu
Phone713-798-8219
Submit Date2020-01-27
Num Groups2
Total Subjects10
Num Males10
Analysis Type DetailLC-MS
Release Date2020-03-11
Release Version1
Cheryl Walker Cheryl Walker
https://dx.doi.org/10.21228/M8ND7K
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Mammal; Subject species: Rattus norvegicus (Factor headings shown in green)

mb_sample_id local_sample_id Treatment
SA094609HFD-BPA14BPA
SA094610HFD-BPA16BPA
SA094611HFD-BPA18BPA
SA094612HFD-BPA13BPA
SA094613HFD-BPA12BPA
SA094614HFD-VEH15vehicle
SA094615HFD-VEH18vehicle
SA094616HFD-VEH12vehicle
SA094617HFD-VEH14vehicle
SA094618HFD-VEH13vehicle
Showing results 1 to 10 of 10
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