Summary of Study ST001095
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000733. The data can be accessed directly via it's Project DOI: 10.21228/M8XM40 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001095 |
| Study Title | Data resource for fully 13C labelled and non-labelled plant tissues (part-I) |
| Study Summary | LC-MS/MS data files of fully 13C labelled and 12C plant tissues, which were utilized to determine the carbon element number for metabolite characterizations. |
| Institute | RIKEN |
| Department | Center for Sustainable Resource Science |
| Laboratory | Metabolome Informatics Research Team |
| Last Name | Tsugawa |
| First Name | Hiroshi |
| Address | 1-7-22 Suehiro-cho, Tsurumi-ku |
| hiroshi.tsugawa@riken.jp | |
| Phone | +81-45-503-9618 |
| Submit Date | 2018-11-08 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Waters) |
| Analysis Type Detail | LC-MS |
| Release Date | 2018-12-11 |
| Release Version | 1 |
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Project:
| Project ID: | PR000733 |
| Project DOI: | doi: 10.21228/M8XM40 |
| Project Title: | Computational metabolomics to characterize metabolites in stable isotope-labelled organisms. |
| Project Summary: | We developed a computational metabolomics workflow to characterize metabolite structures by using the set of fully 13C-labelled and non-labelled LC-MS/MS data. The platform was applied to structure elucidations for 31 tissues of 12 plant species, resulting in the assignments of 1,092 structures and 344 formulas to 3,604 carbon-determined metabolite ions. We also applied the methodology to find the trait-metabolite associations in natural accessions of Arabidopsis thaliana. |
| Institute: | RIKEN |
| Department: | Center for Sustainable Resource Science |
| Laboratory: | Metabolome Informatics Research Team |
| Last Name: | Tsugawa |
| First Name: | Hiroshi |
| Address: | 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan |
| Email: | hiroshi.tsugawa@riken.jp |
| Phone: | +81-45-503-9618 |
