Summary of Study ST001847
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001164. The data can be accessed directly via it's Project DOI: 10.21228/M87T3G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001847 |
| Study Title | Standardized gnotobiotic mouse model for NMR based phenotyping |
| Study Summary | Germ-free mice were inoculated with 15 representative bacterial strains selected from specific pathogen-free mice. All three microbiota mouse models were generated in two different facility sites and collected plasma sample phenotyped by NMR. 58 mice from Facility 1 (32 males and 26 females) and 59 mice from Facility 2 (29 males and 30 females) were used for analysis. |
| Institute | Bioaster |
| Department | OMICS Hub |
| Laboratory | Metabolomics |
| Last Name | Andrei |
| First Name | B |
| Address | 40 avenue Tony Garnier |
| andrei.bunescu@bioaster.org | |
| Phone | +33481110650 |
| Submit Date | 2021-06-17 |
| Num Groups | 3 |
| Total Subjects | 117 |
| Num Males | 61 |
| Num Females | 56 |
| Publications | https://doi.org/10.1101/2019.12.30.890954 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | fid |
| Analysis Type Detail | NMR |
| Release Date | 2021-08-02 |
| Release Version | 1 |
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Treatment:
| Treatment ID: | TR001936 |
| Treatment Summary: | SOPF (C57BL/6J ) mice were obtained from Charles River Lab GF (C57BL/6J ) mice were produced in-house by aseptic hysterectomy of a SOPF (C57BL/6J) female GM15 founders were 8-week-old GF (C57BL/6J) mice colonized by oral inoculations of the GM15 bacterial community: Bacteroides acidifaciens MD185 Bacteroides caecimuris MD237 Parabacteroides goldsteinii MD072 Clostridium cocleatum I50 Enterocloster clostridioformis YL32 Clostridium sp. MD294 Clostridium sp. MD300 Subtilibacillum caecimuris MD335 Longibacillum caecimuris MD329 Irregularicoccus caecimuris MD308 Lactobacillus johnsonii MD006 Ligilactobacillus murinus MD040 Limosilactobacillus reuteri MD207 Anaerotruncus colihominis JM4-15 Escherichia coli Mt1B1 |
