Summary of Study ST002880

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001801. The data can be accessed directly via it's Project DOI: 10.21228/M8X43S This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST002880
Study TitleHypoxia-driven dynamics of tomato root lipidome
Study SummaryA distinct, hypoxia-related lipid composition of Solanum lycopersicum root tissue was observed. Out of 965 lipid species, 33 were exclusively detected in this condition. Among the lipid classes observed, glycerolipids and glycerophospholipids dominated by far (77%). Significantly, the abundance of triacylglycerols increased with hypoxic stress, while sitosterol esters, digalactosyldiacylglycerols, and phosphatidylcholine decreased. Alongside, an increased level of polyunsaturation was observed in the fatty acid chains, with 18:2, 18:3 residues showing a significant increase. Of note, hexadecatetraenoic acid (16:4) was identified in hypoxia condition samples.
Institute
Leibniz Institute for Plasma Science and Technology
Last NameWende
First NameKristian
AddressF.-Hausdorff-Str. 2, D-17489 Greifswald
Emailkristian.wende@inp-greifswald.de
Phone+49 3834 554 3923
Submit Date2023-09-15
Raw Data AvailableYes
Raw Data File Type(s)mzML
Analysis Type DetailLC-MS
Release Date2023-10-16
Release Version1
Kristian Wende Kristian Wende
https://dx.doi.org/10.21228/M8X43S
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Plant; Subject species: Lycopersicon esculentum (Factor headings shown in green)

mb_sample_id local_sample_id condition
SA314678Control_2_4_negcontrol
SA314679Control_2_4_poscontrol
SA314680Control_2_5_poscontrol
SA314681Control_2_3_poscontrol
SA314682Control_2_3_negcontrol
SA314683Control_2_2_negcontrol
SA314684Control_2_2_poscontrol
SA314685Control_2_6_negcontrol
SA314686Control_2_7_negcontrol
SA314687Control_2_9_negcontrol
SA314688Control_2_9_poscontrol
SA314689Control_1_1_negcontrol
SA314690Control_2_8_poscontrol
SA314691Control_2_8_negcontrol
SA314692Control_2_1_poscontrol
SA314693Control_2_7_poscontrol
SA314694Control_2_6_poscontrol
SA314695Control_2_5_negcontrol
SA314696Control_1_4_negcontrol
SA314697Control_1_4_poscontrol
SA314698Control_1_5_negcontrol
SA314699Control_1_3_poscontrol
SA314700Control_1_3_negcontrol
SA314701Control_1_1_poscontrol
SA314702Control_2_1_negcontrol
SA314703Control_1_2_poscontrol
SA314704Control_1_5_poscontrol
SA314705Control_1_2_negcontrol
SA314706Control_1_8_poscontrol
SA314707Control_1_9_poscontrol
SA314708Control_1_6_negcontrol
SA314709Control_1_8_negcontrol
SA314710Control_1_9_negcontrol
SA314711Control_1_7_poscontrol
SA314712Control_1_6_poscontrol
SA314713Control_1_7_negcontrol
SA314714Hypoxia_2_4_neghypoxia
SA314715Hypoxia_2_5_neghypoxia
SA314716Hypoxia_2_4_poshypoxia
SA314717Hypoxia_2_3_neghypoxia
SA314718Hypoxia_2_5_poshypoxia
SA314719Hypoxia_2_2_neghypoxia
SA314720Hypoxia_2_2_poshypoxia
SA314721Hypoxia_2_3_poshypoxia
SA314722Hypoxia_2_8_neghypoxia
SA314723Hypoxia_2_9_neghypoxia
SA314724Hypoxia_2_9_poshypoxia
SA314725Hypoxia_2_1_poshypoxia
SA314726Hypoxia_2_8_poshypoxia
SA314727Hypoxia_2_7_poshypoxia
SA314728Hypoxia_2_6_poshypoxia
SA314729Hypoxia_2_7_neghypoxia
SA314730Hypoxia_2_6_neghypoxia
SA314731Hypoxia_1_1_neghypoxia
SA314732Hypoxia_1_4_neghypoxia
SA314733Hypoxia_1_4_poshypoxia
SA314734Hypoxia_1_5_neghypoxia
SA314735Hypoxia_1_3_poshypoxia
SA314736Hypoxia_1_3_neghypoxia
SA314737Hypoxia_1_1_poshypoxia
SA314738Hypoxia_1_2_neghypoxia
SA314739Hypoxia_1_2_poshypoxia
SA314740Hypoxia_1_5_poshypoxia
SA314741Hypoxia_1_6_neghypoxia
SA314742Hypoxia_1_8_poshypoxia
SA314743Hypoxia_1_9_neghypoxia
SA314744Hypoxia_1_9_poshypoxia
SA314745Hypoxia_1_8_neghypoxia
SA314746Hypoxia_1_7_poshypoxia
SA314747Hypoxia_1_6_poshypoxia
SA314748Hypoxia_1_7_neghypoxia
SA314749Hypoxia_2_1_neghypoxia
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