Summary of Study ST001278
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000863. The data can be accessed directly via it's Project DOI: 10.21228/M84M57 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001278 |
Study Title | POAG and Control Aqueous Humor IROA Metabolites from Veterans Affairs Patients |
Study Type | untargeted LC-MS/MS metabolomics IROA |
Study Summary | We performed high-performance liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis of the metabolome of POAG and Control patients. Samples were collected asynchronously. |
Institute | University of Miami |
Department | Ophthalmology, Bascom Palmer Eye Institute |
Laboratory | Sanjoy K. Bhattacharya |
Last Name | Bhattacharya |
First Name | Sanjoy |
Address | 1638 NW 10th Avenue, Miami, FL 33136 |
SBhattacharya@med.miami.edu | |
Phone | 305-482-4103 |
Submit Date | 2019-11-14 |
Num Groups | 2 |
Total Subjects | 41 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2020-05-14 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN002119 |
---|---|
Analysis type | MS |
Chromatography type | Reversed phase |
Chromatography system | Thermo Accela 600 |
Column | ACE Excel 2 C18-PFP (100 x 2.1mm, 2um) |
MS Type | ESI |
MS instrument type | Orbitrap |
MS instrument name | Thermo Q Exactive Orbitrap |
Ion Mode | UNSPECIFIED |
Units | C12:C13 Ratio |
MS:
MS ID: | MS001974 |
Analysis ID: | AN002119 |
Instrument Name: | Thermo Q Exactive Orbitrap |
Instrument Type: | Orbitrap |
MS Type: | ESI |
MS Comments: | Both Positive and Negative Ion Mode Metabolite identification and relative quantification were performed using Clusterfinder Build 3.1.10 (IROA Technologies). Thermo raw files were converted into mzxml files before importation into the Clusterfinder software. The manufacturer protocols were followed to recognize IROA peak pairs and determine molecular formulas. Metabolites were identified by comparing retention time, molecular formula and molecular ion m/z with the Mass Spectrometry Metabolite Library of Standards (MSMLS, IROA technologies). |
Ion Mode: | UNSPECIFIED |