Summary of Study ST001688
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001074. The data can be accessed directly via it's Project DOI: 10.21228/M8W11P This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001688 |
Study Title | A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism (part-II) |
Study Type | Bacterial Metabolomics |
Study Summary | The C18 positive mode data for A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism. |
Institute | Stanford University |
Department | Microbiology and Immunology |
Laboratory | Justin Sonnenburg |
Last Name | Van Treuren |
First Name | Will |
Address | Sherman Fairchild Building, 299 Campus Drive, Stanford CA, 94305 |
wdwvt@stanford.edu | |
Phone | 7209370980 |
Submit Date | 2021-01-20 |
Raw Data Available | Yes |
Raw Data File Type(s) | mzML |
Analysis Type Detail | LC-MS |
Release Date | 2021-05-17 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN002756 | AN002757 | AN002758 |
---|---|---|---|
Analysis type | MS | MS | MS |
Chromatography type | Reversed phase | Reversed phase | HILIC |
Chromatography system | Agilent 1290 Infinity II | Agilent 1290 Infinity II | Agilent 1290 Infinity II |
Column | Waters Acquity BEH C18 (100 x 2mm,1.7um) | Waters Acquity BEH C18 (100 x 2mm,1.7um) | Waters Acquity BEH Amide (150 x 2.1mm,1.7um) |
MS Type | ESI | ESI | ESI |
MS instrument type | QTOF | QTOF | QTOF |
MS instrument name | Agilent 6540 QTOF | Agilent 6540 QTOF | Agilent 6540 QTOF |
Ion Mode | POSITIVE | NEGATIVE | POSITIVE |
Units | counts (area) | counts (area) | Counts |
Chromatography:
Chromatography ID: | CH002036 |
Chromatography Summary: | Please see 'methods.pdf' associated with this project. This is the data from the C18 positive method. |
Instrument Name: | Agilent 1290 Infinity II |
Column Name: | Waters Acquity BEH C18 (100 x 2mm,1.7um) |
Chromatography Type: | Reversed phase |
Chromatography ID: | CH002037 |
Chromatography Summary: | Please see 'methods.pdf' associated with this project. This is the data from the C18 negative method. |
Instrument Name: | Agilent 1290 Infinity II |
Column Name: | Waters Acquity BEH C18 (100 x 2mm,1.7um) |
Chromatography Type: | Reversed phase |
Chromatography ID: | CH002038 |
Chromatography Summary: | Please see 'methods.pdf' associated with this project. This is the data from the HILIC positive method method. |
Instrument Name: | Agilent 1290 Infinity II |
Column Name: | Waters Acquity BEH Amide (150 x 2.1mm,1.7um) |
Chromatography Type: | HILIC |