Summary of Study ST001688
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001074. The data can be accessed directly via it's Project DOI: 10.21228/M8W11P This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST001688 |
| Study Title | A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism (part-II) |
| Study Type | Bacterial Metabolomics |
| Study Summary | The C18 positive mode data for A gut microbe-focused metabolomics pipeline enables mechanistic interrogation of microbiome metabolism. |
| Institute | Stanford University |
| Department | Microbiology and Immunology |
| Laboratory | Justin Sonnenburg |
| Last Name | Van Treuren |
| First Name | Will |
| Address | Sherman Fairchild Building, 299 Campus Drive, Stanford CA, 94305 |
| wdwvt@stanford.edu | |
| Phone | 7209370980 |
| Submit Date | 2021-01-20 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | mzML |
| Analysis Type Detail | LC-MS |
| Release Date | 2021-05-17 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
| Analysis ID | AN002756 | AN002757 | AN002758 |
|---|---|---|---|
| Analysis type | MS | MS | MS |
| Chromatography type | Reversed phase | Reversed phase | HILIC |
| Chromatography system | Agilent 1290 Infinity II | Agilent 1290 Infinity II | Agilent 1290 Infinity II |
| Column | Waters Acquity BEH C18 (100 x 2mm,1.7um) | Waters Acquity BEH C18 (100 x 2mm,1.7um) | Waters Acquity BEH Amide (150 x 2.1mm,1.7um) |
| MS Type | ESI | ESI | ESI |
| MS instrument type | QTOF | QTOF | QTOF |
| MS instrument name | Agilent 6540 QTOF | Agilent 6540 QTOF | Agilent 6540 QTOF |
| Ion Mode | POSITIVE | NEGATIVE | POSITIVE |
| Units | counts (area) | counts (area) | Counts |
MS:
| MS ID: | MS002553 |
| Analysis ID: | AN002756 |
| Instrument Name: | Agilent 6540 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| MS Comments: | Please see 'methods.pdf' associated with this project. This is the data from the C18 positive method. |
| Ion Mode: | POSITIVE |
| MS ID: | MS002554 |
| Analysis ID: | AN002757 |
| Instrument Name: | Agilent 6540 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| MS Comments: | Please see 'methods.pdf' associated with this project. This is the data from the C18 negative method. |
| Ion Mode: | NEGATIVE |
| MS ID: | MS002555 |
| Analysis ID: | AN002758 |
| Instrument Name: | Agilent 6540 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| MS Comments: | Please see 'methods.pdf' associated with this project. This is the data from the HILIC positive method. |
| Ion Mode: | POSITIVE |
