Summary of Study ST000591
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000432. The data can be accessed directly via it's Project DOI: 10.21228/M86W3V This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000591 |
| Study Title | Metablomic profiling in acc1-5 mutant and wild type arabidiopsis |
| Study Summary | This experiment tests the metabolic consequence of a mutation at the ACC1 gene (At1g36160). The allele of acc1-5 bearing an EMS mutation, which cause a single amino acid substitution from aspartic acid to asparagine. Seedlings from both the acc1-5 mutant and the wild type were harvested and analyzed via HILIC LC-MS. Of particular interest are metabolites which would be affected by depletion of malonyl-CoA pools (flavenoids) and primary metabolites. |
| Institute | Agriculture and Agri-Food Canada |
| Department | London Research and Development Centre |
| Laboratory | Renaud |
| Last Name | Renaud |
| First Name | Justin |
| Address | 1391 Sandford street, London, Ontario, Canada |
| justin.renaud@agr.gc.ca | |
| Phone | 519-953-6698 |
| Submit Date | 2017-03-12 |
| Publications | Chen, Chen, et al. "Cytosolic acetyl-CoA promotes histone acetylation predominantly at H3K27 in Arabidopsis." Nature Plants (2017): 1. |
| Raw Data Available | Yes |
| Raw Data File Type(s) | raw(Thermo) |
| Analysis Type Detail | LC-MS |
| Release Date | 2017-10-25 |
| Release Version | 1 |
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Factors:
Subject type: Plant; Subject species: Arabidopsis thaliana (Factor headings shown in green)
| mb_sample_id | local_sample_id | Genotype |
|---|---|---|
| SA032598 | ACC1-6 | acc1-knockout mutant |
| SA032599 | ACC1-7 | acc1-knockout mutant |
| SA032600 | ACC1-5 | acc1-knockout mutant |
| SA032601 | ACC1-1 | acc1-knockout mutant |
| SA032602 | ACC1-2 | acc1-knockout mutant |
| SA032603 | ACC1-3 | acc1-knockout mutant |
| SA032604 | ACC1-4 | acc1-knockout mutant |
| SA032591 | WT-7 | Wild-type |
| SA032592 | WT-1 | Wild-type |
| SA032593 | WT-5 | Wild-type |
| SA032594 | WT-6 | Wild-type |
| SA032595 | WT-2 | Wild-type |
| SA032596 | WT-3 | Wild-type |
| SA032597 | WT-4 | Wild-type |
| Showing results 1 to 14 of 14 |
