Summary of study ST000591

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000432. The data can be accessed directly via it's Project DOI: 10.21228/M86W3V This work is supported by NIH grant, U2C- DK119886.

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Study IDST000591
Study TitleMetablomic profiling in acc1-5 mutant and wild type arabidiopsis
Study SummaryThis experiment tests the metabolic consequence of a mutation at the ACC1 gene (At1g36160). The allele of acc1-5 bearing an EMS mutation, which cause a single amino acid substitution from aspartic acid to asparagine. Seedlings from both the acc1-5 mutant and the wild type were harvested and analyzed via HILIC LC-MS. Of particular interest are metabolites which would be affected by depletion of malonyl-CoA pools (flavenoids) and primary metabolites.
Institute
Agriculture and Agri-Food Canada
DepartmentLondon Research and Development Centre
LaboratoryRenaud
Last NameRenaud
First NameJustin
Address1391 Sandford street, London, Ontario, Canada
Emailjustin.renaud@agr.gc.ca
Phone519-953-6698
Submit Date2017-03-12
PublicationsChen, Chen, et al. "Cytosolic acetyl-CoA promotes histone acetylation predominantly at H3K27 in Arabidopsis." Nature Plants (2017): 1.
Raw Data AvailableYes
Raw Data File Type(s).raw
Analysis Type DetailLC-MS
Release Date2017-10-25
Release Version1
Justin Renaud Justin Renaud
https://dx.doi.org/10.21228/M86W3V
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Factors:

Subject type: Plant; Subject species: Arabidopsis thaliana (Factor headings shown in green)

mb_sample_id local_sample_id Genotype
SA032598ACC1-6acc1-knockout mutant
SA032599ACC1-7acc1-knockout mutant
SA032600ACC1-5acc1-knockout mutant
SA032601ACC1-1acc1-knockout mutant
SA032602ACC1-2acc1-knockout mutant
SA032603ACC1-3acc1-knockout mutant
SA032604ACC1-4acc1-knockout mutant
SA032591WT-7Wild-type
SA032592WT-1Wild-type
SA032593WT-5Wild-type
SA032594WT-6Wild-type
SA032595WT-2Wild-type
SA032596WT-3Wild-type
SA032597WT-4Wild-type
Showing results 1 to 14 of 14
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