Summary of Study ST001775

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001129. The data can be accessed directly via it's Project DOI: 10.21228/M8RX1D This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)
Study IDST001775
Study TitlePlasma metabolomics of diverse mouse strains infected with Plasmodium chabaudi
Study SummaryTo uncover links between metabolism and disease severity in murine malaria, we performed plasma metabolomics via Metabolon on eight inbred, Plasmodium chabaudi-infected mouse strains with diverse disease phenotypes. We sacrificed and collected plasma from >=3 mice per strain per day of acute infection alongside uninfected control mice (approximately days 5-12 depending on mouse strain). We collected disease severity data, e.g. weight loss, liver enzymes, and anemia, concurrently. Together, these data enable 1) a picture of strain-specific and conserved metabolic responses during acute malaria, and 2) a comparison between metabolic responses and disease severity.
Institute
Stanford University
DepartmentMicrobiology & Immunology
LaboratoryDavid Schneider
Last NameSchneider
First NameDavid
Address299 Campus Drive, Stanford, CA 94305
Emaildschneid@stanford.edu
Phone650-724-8064
Submit Date2021-04-11
Num Groups8 mouse strains +/- Plasmodium infection
Total Subjects369
Num Females369
Analysis Type DetailLC-MS
Release Date2021-05-21
Release Version1
David Schneider David Schneider
https://dx.doi.org/10.21228/M8RX1D
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Strain SacDay Infected_yn
SA164573StrainsMetabs_129_1_34129S1/SvImJ 10 TRUE
SA164574StrainsMetabs_129_1_32129S1/SvImJ 10 TRUE
SA164575StrainsMetabs_129_1_33129S1/SvImJ 10 TRUE
SA164576StrainsMetabs_129_1_31129S1/SvImJ 10 TRUE
SA164577StrainsMetabs_129_1_30129S1/SvImJ 10 TRUE
SA164578StrainsMetabs_129_2_B6_2_30129S1/SvImJ 11 FALSE
SA164579StrainsMetabs_129_2_B6_2_31129S1/SvImJ 11 FALSE
SA164580StrainsMetabs_129_2_B6_2_20129S1/SvImJ 11 TRUE
SA164581StrainsMetabs_129_2_B6_2_18129S1/SvImJ 11 TRUE
SA164582StrainsMetabs_129_2_B6_2_16129S1/SvImJ 11 TRUE
SA164583StrainsMetabs_129_2_B6_2_17129S1/SvImJ 11 TRUE
SA164584StrainsMetabs_129_2_B6_2_19129S1/SvImJ 11 TRUE
SA164585StrainsMetabs_129_2_B6_2_25129S1/SvImJ 12 TRUE
SA164586StrainsMetabs_129_2_B6_2_21129S1/SvImJ 12 TRUE
SA164587StrainsMetabs_129_2_B6_2_22129S1/SvImJ 12 TRUE
SA164588StrainsMetabs_129_2_B6_2_24129S1/SvImJ 12 TRUE
SA164589StrainsMetabs_129_2_B6_2_23129S1/SvImJ 12 TRUE
SA164590StrainsMetabs_129_2_B6_2_2129S1/SvImJ 3 TRUE
SA164591StrainsMetabs_129_2_B6_2_27129S1/SvImJ 3 TRUE
SA164592StrainsMetabs_129_2_B6_2_1129S1/SvImJ 3 TRUE
SA164593StrainsMetabs_129_2_B6_2_7129S1/SvImJ 4 TRUE
SA164594StrainsMetabs_129_2_B6_2_8129S1/SvImJ 4 TRUE
SA164595StrainsMetabs_129_2_B6_2_6129S1/SvImJ 4 TRUE
SA164596StrainsMetabs_129_2_B6_2_13129S1/SvImJ 5 TRUE
SA164597StrainsMetabs_129_2_B6_2_11129S1/SvImJ 5 TRUE
SA164598StrainsMetabs_129_2_B6_2_12129S1/SvImJ 5 TRUE
SA164599StrainsMetabs_129_1_10129S1/SvImJ 6 TRUE
SA164600StrainsMetabs_129_1_9129S1/SvImJ 6 TRUE
SA164601StrainsMetabs_129_1_6129S1/SvImJ 6 TRUE
SA164602StrainsMetabs_129_1_7129S1/SvImJ 6 TRUE
SA164603StrainsMetabs_129_1_8129S1/SvImJ 6 TRUE
SA164604StrainsMetabs_129_1_17129S1/SvImJ 7 FALSE
SA164605StrainsMetabs_129_1_16129S1/SvImJ 7 FALSE
SA164606StrainsMetabs_129_1_12129S1/SvImJ 7 TRUE
SA164607StrainsMetabs_129_1_15129S1/SvImJ 7 TRUE
SA164608StrainsMetabs_129_1_14129S1/SvImJ 7 TRUE
SA164609StrainsMetabs_129_1_11129S1/SvImJ 7 TRUE
SA164610StrainsMetabs_129_1_13129S1/SvImJ 7 TRUE
SA164611StrainsMetabs_129_1_19129S1/SvImJ 8 TRUE
SA164612StrainsMetabs_129_1_21129S1/SvImJ 8 TRUE
SA164613StrainsMetabs_129_1_22129S1/SvImJ 8 TRUE
SA164614StrainsMetabs_129_1_20129S1/SvImJ 8 TRUE
SA164615StrainsMetabs_129_1_18129S1/SvImJ 8 TRUE
SA164616StrainsMetabs_129_1_28129S1/SvImJ 9 FALSE
SA164617StrainsMetabs_129_1_29129S1/SvImJ 9 FALSE
SA164618StrainsMetabs_129_1_25129S1/SvImJ 9 TRUE
SA164619StrainsMetabs_129_1_24129S1/SvImJ 9 TRUE
SA164620StrainsMetabs_129_1_26129S1/SvImJ 9 TRUE
SA164621StrainsMetabs_129_1_23129S1/SvImJ 9 TRUE
SA164622StrainsMetabs_129_1_27129S1/SvImJ 9 TRUE
SA164623StrainsMetabs_AJ_49A/J 10 TRUE
SA164624StrainsMetabs_AJ_48A/J 10 TRUE
SA164625StrainsMetabs_AJ_9A/J 3 FALSE
SA164626StrainsMetabs_AJ_8A/J 3 FALSE
SA164627StrainsMetabs_AJ_4A/J 3 TRUE
SA164628StrainsMetabs_AJ_5A/J 3 TRUE
SA164629StrainsMetabs_AJ_6A/J 3 TRUE
SA164630StrainsMetabs_AJ_10A/J 4 TRUE
SA164631StrainsMetabs_AJ_13A/J 4 TRUE
SA164632StrainsMetabs_AJ_14A/J 4 TRUE
SA164633StrainsMetabs_AJ_21A/J 5 FALSE
SA164634StrainsMetabs_AJ_20A/J 5 FALSE
SA164635StrainsMetabs_AJ_15A/J 5 TRUE
SA164636StrainsMetabs_AJ_16A/J 5 TRUE
SA164637StrainsMetabs_AJ_17A/J 5 TRUE
SA164638StrainsMetabs_AJ_24A/J 6 TRUE
SA164639StrainsMetabs_AJ_25A/J 6 TRUE
SA164640StrainsMetabs_AJ_26A/J 6 TRUE
SA164641StrainsMetabs_AJ_22A/J 6 TRUE
SA164642StrainsMetabs_AJ_23A/J 6 TRUE
SA164643StrainsMetabs_AJ_32A/J 7 FALSE
SA164644StrainsMetabs_AJ_33A/J 7 FALSE
SA164645StrainsMetabs_AJ_29A/J 7 TRUE
SA164646StrainsMetabs_AJ_28A/J 7 TRUE
SA164647StrainsMetabs_AJ_31A/J 7 TRUE
SA164648StrainsMetabs_AJ_27A/J 7 TRUE
SA164649StrainsMetabs_AJ_30A/J 7 TRUE
SA164650StrainsMetabs_AJ_37A/J 8 TRUE
SA164651StrainsMetabs_AJ_39A/J 8 TRUE
SA164652StrainsMetabs_AJ_35A/J 8 TRUE
SA164653StrainsMetabs_AJ_38A/J 8 TRUE
SA164654StrainsMetabs_AJ_34A/J 8 TRUE
SA164655StrainsMetabs_AJ_45A/J 9 FALSE
SA164656StrainsMetabs_AJ_44A/J 9 FALSE
SA164657StrainsMetabs_AJ_46A/J 9 TRUE
SA164658StrainsMetabs_AJ_40A/J 9 TRUE
SA164659StrainsMetabs_AJ_42A/J 9 TRUE
SA164660StrainsMetabs_AJ_41A/J 9 TRUE
SA164661StrainsMetabs_AJ_43A/J 9 TRUE
SA164662StrainsMetabs_129_2_B6_2_47C57BL/6 10 TRUE
SA164663StrainsMetabs_129_2_B6_2_50C57BL/6 10 TRUE
SA164664StrainsMetabs_129_2_B6_2_48C57BL/6 10 TRUE
SA164665StrainsMetabs_129_2_B6_2_46C57BL/6 10 TRUE
SA164666StrainsMetabs_129_2_B6_2_49C57BL/6 10 TRUE
SA164667StrainsMetabs_129_2_B6_2_70C57BL/6 11 FALSE
SA164668StrainsMetabs_129_2_B6_2_69C57BL/6 11 FALSE
SA164669StrainsMetabs_129_2_B6_2_52C57BL/6 11 TRUE
SA164670StrainsMetabs_129_2_B6_2_51C57BL/6 11 TRUE
SA164671StrainsMetabs_129_2_B6_2_55C57BL/6 11 TRUE
SA164672StrainsMetabs_129_2_B6_2_53C57BL/6 11 TRUE
Showing page 1 of 4     Results:    1  2  3  4  Next     Showing results 1 to 100 of 369
  logo